RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 TRMT1Q9NXH9 659 aaKnown RBP13.21□□□□□ -0.29
HDAC8-210ENST00000412342 KLHL8Q9P2G9 620 aaPredicted RBP13.21□□□□□ -0.29
HDAC8-210ENST00000412342 TRHDEQ9UKU6 1024 aa13.21□□□□□ -0.29
HDAC8-210ENST00000412342 CDV3Q9UKY7 258 aaKnown RBP13.21□□□□□ -0.29
HDAC8-210ENST00000412342 DNPEPQ9ULA0 475 aa13.21□□□□□ -0.29
HDAC8-210ENST00000412342 A0A0U1RQS6 177 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 A6NNZ2 444 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 A8MX80 341 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 ENC1O14682 589 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 KCNN4O15554 427 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 RECQL5O94762 991 aaPredicted RBP13.2□□□□□ -0.3
HDAC8-210ENST00000412342 CER1O95813 267 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 ELFN1P0C7U0 828 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 THEGLP0DJG4 465 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 CYP2A6P11509 494 aaPredicted RBP13.2□□□□□ -0.3
HDAC8-210ENST00000412342 CD59P13987 128 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 CA4P22748 312 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 C21orf59P57076 290 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 SGCGQ13326 291 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 DARS2Q6PI48 645 aaKnown RBP13.2□□□□□ -0.3
HDAC8-210ENST00000412342 CRTC1Q6UUV9 634 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 DBX2Q6ZNG2 339 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 USP45Q70EL2 814 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 PID1Q7Z2X4 250 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 HSD11B1LQ7Z5J1 315 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 KLHDC8BQ8IXV7 354 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 PELI3Q8N2H9 469 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 SLC35F6Q8N357 371 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 PAF1Q8N7H5 531 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 LPCAT1Q8NF37 534 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 FAM174AQ8TBP5 190 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 ATG4AQ8WYN0 398 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 KLHDC7BQ96G42 594 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 MRGPRX2Q96LB1 330 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 SPATA13Q96N96 652 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 GBA3Q9H227 469 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 ERVMER34-1Q9H9K5 563 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 JRKLQ9Y4A0 524 aa13.2□□□□□ -0.3
HDAC8-210ENST00000412342 CABIN1Q9Y6J0 2220 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 A0A1B0GTQ1 180 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 LOC285095A0A1B0GVY8 99 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 C5orf60A6NFR6 353 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 ANKRD66B4E2M5 251 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 PSMD11O00231 422 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 FPGTO14772 594 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 LIASO43766 372 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 LZTS3O60299 673 aaPredicted RBP13.19□□□□□ -0.3
HDAC8-210ENST00000412342 OPHN1O60890 802 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 C1SP09871 688 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 ATXN1LP0C7T5 689 aaKnown RBP13.19□□□□□ -0.3
HDAC8-210ENST00000412342 ATXN3P54252 364 aaPredicted RBP13.19□□□□□ -0.3
HDAC8-210ENST00000412342 GDF10P55107 478 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 PTSQ03393 145 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 CDK18Q07002 472 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 GALNT3Q14435 633 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 ANKRD20A2Q5SQ80 823 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 PRAMEF14Q5SWL7 426 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 ANKRD20A1Q5TYW2 823 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 ANKRD20A3Q5VUR7 823 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 LRRC66Q68CR7 880 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 Q6ZSR6 202 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 TECPR1Q7Z6L1 1165 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 CCDC110Q8TBZ0 833 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 SKA1Q96BD8 255 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 RTP4Q96DX8 246 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 DTD2Q96FN9 168 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 ELF4Q99607 663 aaPredicted RBP13.19□□□□□ -0.3
HDAC8-210ENST00000412342 RTKNQ9BST9 563 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 MLPHQ9BV36 600 aaPredicted RBP13.19□□□□□ -0.3
HDAC8-210ENST00000412342 CAAP1Q9H8G2 361 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 GDF3Q9NR23 364 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 UBP1Q9NZI7 540 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 FAM153AQ9UHL3 310 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 RSPH14Q9UHP6 348 aa13.19□□□□□ -0.3
HDAC8-210ENST00000412342 F5H423 210 aaPredicted RBP13.18□□□□□ -0.3
HDAC8-210ENST00000412342 MAGEC1O60732 1142 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 PMPCBO75439 489 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 ZNF189O75820 626 aaPredicted RBP13.18□□□□□ -0.3
HDAC8-210ENST00000412342 NDST3O95803 873 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 ATP1A1P05023 1023 aaKnown RBP13.18□□□□□ -0.3
HDAC8-210ENST00000412342 ZNF30P17039 623 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 SDHBP21912 280 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 NFKBIAP25963 317 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 PSMB4P28070 264 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 CXCR5P32302 372 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 RABIFP47224 123 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 RXRGP48443 463 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 STC1P52823 247 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 EPHB1P54762 984 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 WNT3AP56704 352 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 SLC14A1Q13336 389 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 FZD2Q14332 565 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 PUM1Q14671 1186 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDAC8-210ENST00000412342 LRRC14Q15048 493 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 PCSK7Q16549 785 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 UAP1L1Q3KQV9 507 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 ZNF569Q5MCW4 686 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 ESRP1Q6NXG1 681 aaKnown RBP13.18□□□□□ -0.3
HDAC8-210ENST00000412342 RFLNAQ6ZTI6 216 aa13.18□□□□□ -0.3
HDAC8-210ENST00000412342 KANSL1Q7Z3B3 1105 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms