RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 WT1P19544 449 aaPredicted RBP14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TRIM23P36406 574 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CSNK1DP48730 415 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 NDST2P52849 883 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 AIF1P55008 147 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TPI1P60174 286 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 RPL7AP62424 266 aaKnown RBP14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 B4GALNT1Q00973 533 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 BCL2L1Q07817 233 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 RALGDSQ12967 914 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 C16orf72Q14CZ0 275 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 AMZ1Q400G9 498 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 MAP9Q49MG5 647 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TMEM164Q5U3C3 297 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 DNAJC24Q6P3W2 148 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 PIM3Q86V86 326 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TSEN2Q8NCE0 465 aaKnown RBP14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 MCEEQ96PE7 176 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SEMA3CQ99985 751 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 LGR4Q9BXB1 951 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SLC39A8Q9C0K1 460 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SPATS2LQ9NUQ6 558 aaKnown RBP14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SEPT11Q9NVA2 429 aaKnown RBP14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 DONSONQ9NYP3 566 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TCRBV5S1A1TA0A578 114 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 ARHGAP42A6NI28 874 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TEX33O43247 280 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SUV39H1O43463 412 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CPNE6O95741 557 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CD82P27701 267 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 ALDH4A1P30038 563 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 PAPOLAP51003 745 aaKnown RBP14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 OR1D5P58170 312 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 POLR2LP62875 67 aaKnown RBP14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 ACOX1Q15067 660 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SYCP1Q15431 976 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 AFMIDQ63HM1 303 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 PNCKQ6P2M8 343 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 MON1BQ7L1V2 547 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 KIAA1524Q8TCG1 905 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 JPH3Q8WXH2 748 aaPredicted RBP14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CNPY3Q9BT09 278 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 WDR26Q9H7D7 661 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SUDS3Q9H7L9 328 aaPredicted RBP14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 GPATCH2LQ9NWQ4 482 aa14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 AKAP7Q9P0M2 348 aaPredicted RBP14.29□□□□□ -0.12
HLA-DQB2-229ENST00000411527 PRSS38A1L453 326 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 RHPN2P1A8MT19 583 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 PDE2AO00408 941 aaPredicted RBP14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TPM2P07951 284 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CCL4P13236 92 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CCNB1P14635 433 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 GM2AP17900 193 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 HTR7P34969 479 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 MAZP56270 477 aaKnown RBP14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 KRT31Q15323 416 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TSR1Q2NL82 804 aaKnown RBP14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 FKBP15Q5T1M5 1219 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 DCUN1D2Q6PH85 259 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 DPPA4Q7L190 304 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 PELI3Q8N2H9 469 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 HTR3CQ8WXA8 447 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 ECHDC3Q96DC8 303 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CINPQ9BW66 212 aaPredicted RBP14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 B3GNT4Q9C0J1 378 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CARS2Q9HA77 564 aaKnown RBP14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 HECTD1Q9ULT8 2610 aa14.28□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SDK2Q58EX2 2172 aa14.27□□□□□ -0.12
HLA-DQB2-229ENST00000411527 MAST4O15021 2626 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 EEF2KO00418 725 aaKnown RBP14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 DAPK3O43293 454 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 PPFIA2O75334 1257 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 FGF1P05230 155 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 DESP17661 470 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 SCNN1BP51168 640 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 NSUN2Q08J23 767 aaKnown RBP eCLIP14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 CLCA4Q14CN2 919 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 CT47A1Q5JQC4 288 aaPredicted RBP14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 PPP1R15BQ5SWA1 713 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 ZNF574Q6ZN55 896 aaPredicted RBP14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 NRROSQ86YC3 692 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 RCBTB1Q8NDN9 531 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 GPBAR1Q8TDU6 330 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 ZDHHC1Q8WTX9 485 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 PCMTD1Q96MG8 357 aaPredicted RBP14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 AGPAT1Q99943 283 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 NUDT22Q9BRQ3 303 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 DHX35Q9H5Z1 703 aaKnown RBP14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 SP110Q9HB58 689 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 GEMIN8Q9NWZ8 242 aaKnown RBP14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 AP4E1Q9UPM8 1137 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 SIK3Q9Y2K2 1263 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 BOD1L1Q8NFC6 3051 aa14.27□□□□□ -0.13
HLA-DQB2-229ENST00000411527 IGHV5-10-1A0A0J9YXX1 117 aa14.26□□□□□ -0.13
HLA-DQB2-229ENST00000411527 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.26□□□□□ -0.13
HLA-DQB2-229ENST00000411527 STMND1H3BQB6 276 aa14.26□□□□□ -0.13
HLA-DQB2-229ENST00000411527 DFFAO00273 331 aa14.26□□□□□ -0.13
HLA-DQB2-229ENST00000411527 TRAFD1O14545 582 aaPredicted RBP14.26□□□□□ -0.13
HLA-DQB2-229ENST00000411527 ZW10O43264 779 aa14.26□□□□□ -0.13
HLA-DQB2-229ENST00000411527 ECEL1O95672 775 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms