RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 WDR26Q9H7D7 661 aa16.78■□□□□ 0.28
MRPL55-220ENST00000411464 FOXJ2Q9P0K8 574 aa16.78■□□□□ 0.28
MRPL55-220ENST00000411464 BOD1L1Q8NFC6 3051 aa16.77■□□□□ 0.28
MRPL55-220ENST00000411464 CYSRT1A8MQ03 144 aa16.77■□□□□ 0.28
MRPL55-220ENST00000411464 TEX33O43247 280 aa16.77■□□□□ 0.28
MRPL55-220ENST00000411464 ITGB6P18564 788 aa16.77■□□□□ 0.28
MRPL55-220ENST00000411464 TRIM23P36406 574 aa16.77■□□□□ 0.28
MRPL55-220ENST00000411464 PAPOLAP51003 745 aaKnown RBP16.77■□□□□ 0.28
MRPL55-220ENST00000411464 TBR1Q16650 682 aa16.77■□□□□ 0.28
MRPL55-220ENST00000411464 AMZ1Q400G9 498 aa16.77■□□□□ 0.28
MRPL55-220ENST00000411464 DCUN1D2Q6PH85 259 aa16.77■□□□□ 0.28
MRPL55-220ENST00000411464 LIPIQ6XZB0 460 aa16.77■□□□□ 0.28
MRPL55-220ENST00000411464 SFTPA2Q8IWL1 248 aa16.77■□□□□ 0.28
MRPL55-220ENST00000411464 TSEN2Q8NCE0 465 aaKnown RBP16.77■□□□□ 0.28
MRPL55-220ENST00000411464 MCEEQ96PE7 176 aa16.77■□□□□ 0.28
MRPL55-220ENST00000411464 SEMA3CQ99985 751 aa16.77■□□□□ 0.28
MRPL55-220ENST00000411464 CINPQ9BW66 212 aaPredicted RBP16.77■□□□□ 0.28
MRPL55-220ENST00000411464 B3GNT4Q9C0J1 378 aa16.77■□□□□ 0.28
MRPL55-220ENST00000411464 SEMA6CQ9H3T2 930 aa16.77■□□□□ 0.28
MRPL55-220ENST00000411464 MAST4O15021 2626 aa16.77■□□□□ 0.27
MRPL55-220ENST00000411464 RHPN2P1A8MT19 583 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 A8MX80 341 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 C9orf172C9J069 976 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 EPHB6O15197 1021 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 CPNE6O95741 557 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 ALDH4A1P30038 563 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 RGRP47804 291 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 RPL7AP62424 266 aaKnown RBP16.76■□□□□ 0.27
MRPL55-220ENST00000411464 CYP4F2P78329 520 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 NFKB2Q00653 900 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 B4GALNT1Q00973 533 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 RALGDSQ12967 914 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 BIRC2Q13490 618 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 ACOX1Q15067 660 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 AFMIDQ63HM1 303 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 PNCKQ6P2M8 343 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 MON1BQ7L1V2 547 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 TMPRSS9Q7Z410 1059 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 DTX1Q86Y01 620 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 CCL4L1Q8NHW4 92 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 ECHDC3Q96DC8 303 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 PCMTD1Q96MG8 357 aaPredicted RBP16.76■□□□□ 0.27
MRPL55-220ENST00000411464 LGR4Q9BXB1 951 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 SLC39A8Q9C0K1 460 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 RDH14Q9HBH5 336 aa16.76■□□□□ 0.27
MRPL55-220ENST00000411464 PRSS38A1L453 326 aa16.75■□□□□ 0.27
MRPL55-220ENST00000411464 EEF2KO00418 725 aaKnown RBP16.75■□□□□ 0.27
MRPL55-220ENST00000411464 TERTO14746 1132 aaKnown RBP16.75■□□□□ 0.27
MRPL55-220ENST00000411464 DAPK3O43293 454 aa16.75■□□□□ 0.27
MRPL55-220ENST00000411464 SUV39H1O43463 412 aa16.75■□□□□ 0.27
MRPL55-220ENST00000411464 B4GAT1O43505 415 aa16.75■□□□□ 0.27
MRPL55-220ENST00000411464 CCNB1P14635 433 aa16.75■□□□□ 0.27
MRPL55-220ENST00000411464 OR1D5P58170 312 aa16.75■□□□□ 0.27
MRPL55-220ENST00000411464 NSUN2Q08J23 767 aaKnown RBP eCLIP16.75■□□□□ 0.27
MRPL55-220ENST00000411464 ILF3Q12906 894 aaKnown RBP eCLIP16.75■□□□□ 0.27
MRPL55-220ENST00000411464 C16orf72Q14CZ0 275 aa16.75■□□□□ 0.27
MRPL55-220ENST00000411464 KRT31Q15323 416 aa16.75■□□□□ 0.27
MRPL55-220ENST00000411464 DPPA4Q7L190 304 aa16.75■□□□□ 0.27
MRPL55-220ENST00000411464 ENOX1Q8TC92 643 aaKnown RBP16.75■□□□□ 0.27
MRPL55-220ENST00000411464 ZDHHC1Q8WTX9 485 aa16.75■□□□□ 0.27
MRPL55-220ENST00000411464 GSDMCQ9BYG8 508 aa16.75■□□□□ 0.27
MRPL55-220ENST00000411464 NUP62CLQ9H1M0 184 aa16.75■□□□□ 0.27
MRPL55-220ENST00000411464 SUDS3Q9H7L9 328 aaPredicted RBP16.75■□□□□ 0.27
MRPL55-220ENST00000411464 CARS2Q9HA77 564 aaKnown RBP16.75■□□□□ 0.27
MRPL55-220ENST00000411464 SPATS2LQ9NUQ6 558 aaKnown RBP16.75■□□□□ 0.27
MRPL55-220ENST00000411464 HECTD1Q9ULT8 2610 aa16.75■□□□□ 0.27
MRPL55-220ENST00000411464 KIF26BQ2KJY2 2108 aa16.75■□□□□ 0.27
MRPL55-220ENST00000411464 TCRBV5S1A1TA0A578 114 aa16.74■□□□□ 0.27
MRPL55-220ENST00000411464 EIF3CLB5ME19 914 aaKnown RBP16.74■□□□□ 0.27
MRPL55-220ENST00000411464 STMND1H3BQB6 276 aa16.74■□□□□ 0.27
MRPL55-220ENST00000411464 PPFIA2O75334 1257 aa16.74■□□□□ 0.27
MRPL55-220ENST00000411464 CCL4P13236 92 aa16.74■□□□□ 0.27
MRPL55-220ENST00000411464 WT1P19544 449 aaPredicted RBP16.74■□□□□ 0.27
MRPL55-220ENST00000411464 SCNN1BP51168 640 aa16.74■□□□□ 0.27
MRPL55-220ENST00000411464 RFTN1Q14699 578 aaPredicted RBP16.74■□□□□ 0.27
MRPL55-220ENST00000411464 CLPPQ16740 277 aaPredicted RBP16.74■□□□□ 0.27
MRPL55-220ENST00000411464 NEK11Q8NG66 645 aa16.74■□□□□ 0.27
MRPL55-220ENST00000411464 GPBAR1Q8TDU6 330 aa16.74■□□□□ 0.27
MRPL55-220ENST00000411464 JPH3Q8WXH2 748 aaPredicted RBP16.74■□□□□ 0.27
MRPL55-220ENST00000411464 EIF3CQ99613 913 aaKnown RBP16.74■□□□□ 0.27
MRPL55-220ENST00000411464 AGPAT1Q99943 283 aa16.74■□□□□ 0.27
MRPL55-220ENST00000411464 SLC25A18Q9H1K4 315 aa16.74■□□□□ 0.27
MRPL55-220ENST00000411464 DHX35Q9H5Z1 703 aaKnown RBP16.74■□□□□ 0.27
MRPL55-220ENST00000411464 SP110Q9HB58 689 aa16.74■□□□□ 0.27
MRPL55-220ENST00000411464 PHPT1Q9NRX4 125 aaPredicted RBP16.74■□□□□ 0.27
MRPL55-220ENST00000411464 GPATCH2LQ9NWQ4 482 aa16.74■□□□□ 0.27
MRPL55-220ENST00000411464 AP4E1Q9UPM8 1137 aa16.74■□□□□ 0.27
MRPL55-220ENST00000411464 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.73■□□□□ 0.27
MRPL55-220ENST00000411464 DFFAO00273 331 aa16.73■□□□□ 0.27
MRPL55-220ENST00000411464 HGSO14964 777 aaPredicted RBP16.73■□□□□ 0.27
MRPL55-220ENST00000411464 FGF1P05230 155 aa16.73■□□□□ 0.27
MRPL55-220ENST00000411464 MYCLP1P12525 358 aaPredicted RBP16.73■□□□□ 0.27
MRPL55-220ENST00000411464 ATP1A2P50993 1020 aa16.73■□□□□ 0.27
MRPL55-220ENST00000411464 RENBPP51606 427 aa16.73■□□□□ 0.27
MRPL55-220ENST00000411464 MAZP56270 477 aaKnown RBP16.73■□□□□ 0.27
MRPL55-220ENST00000411464 AP1S1P61966 158 aa16.73■□□□□ 0.27
MRPL55-220ENST00000411464 PEX6Q13608 980 aa16.73■□□□□ 0.27
MRPL55-220ENST00000411464 PPP1R15BQ5SWA1 713 aa16.73■□□□□ 0.27
MRPL55-220ENST00000411464 ZNF438Q7Z4V0 828 aa16.73■□□□□ 0.27
MRPL55-220ENST00000411464 NUS1Q96E22 293 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms