RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CRTC1Q6UUV9 634 aa22.43■■□□□ 1.18
PTCD3-203ENST00000409783 KDM7AQ6ZMT4 941 aa22.43■■□□□ 1.18
PTCD3-203ENST00000409783 USP45Q70EL2 814 aa22.43■■□□□ 1.18
PTCD3-203ENST00000409783 SPATS2Q86XZ4 545 aaKnown RBP22.43■■□□□ 1.18
PTCD3-203ENST00000409783 RASGEF1CQ8N431 466 aa22.43■■□□□ 1.18
PTCD3-203ENST00000409783 MINDY1Q8N5J2 469 aa22.43■■□□□ 1.18
PTCD3-203ENST00000409783 CCDC110Q8TBZ0 833 aa22.43■■□□□ 1.18
PTCD3-203ENST00000409783 NETO1Q8TDF5 533 aa22.43■■□□□ 1.18
PTCD3-203ENST00000409783 C1orf54Q8WWF1 131 aa22.43■■□□□ 1.18
PTCD3-203ENST00000409783 COQ10AQ96MF6 247 aa22.43■■□□□ 1.18
PTCD3-203ENST00000409783 LYSMD1Q96S90 227 aa22.43■■□□□ 1.18
PTCD3-203ENST00000409783 TMEM121Q9BTD3 319 aa22.43■■□□□ 1.18
PTCD3-203ENST00000409783 GTPBP2Q9BX10 602 aaKnown RBP22.43■■□□□ 1.18
PTCD3-203ENST00000409783 TMEM9BQ9NQ34 198 aa22.43■■□□□ 1.18
PTCD3-203ENST00000409783 MBNL1Q9NR56 388 aaKnown RBP22.43■■□□□ 1.18
PTCD3-203ENST00000409783 FAM153AQ9UHL3 310 aa22.43■■□□□ 1.18
PTCD3-203ENST00000409783 CAPN8A6NHC0 703 aa22.42■■□□□ 1.18
PTCD3-203ENST00000409783 F5H423 210 aaPredicted RBP22.42■■□□□ 1.18
PTCD3-203ENST00000409783 PMPCBO75439 489 aa22.42■■□□□ 1.18
PTCD3-203ENST00000409783 ZNF189O75820 626 aaPredicted RBP22.42■■□□□ 1.18
PTCD3-203ENST00000409783 RECQL5O94762 991 aaPredicted RBP22.42■■□□□ 1.18
PTCD3-203ENST00000409783 ELFN1P0C7U0 828 aa22.42■■□□□ 1.18
PTCD3-203ENST00000409783 PCSK7Q16549 785 aa22.42■■□□□ 1.18
PTCD3-203ENST00000409783 WSCD2Q2TBF2 565 aa22.42■■□□□ 1.18
PTCD3-203ENST00000409783 HLA-BQ31612 363 aa22.42■■□□□ 1.18
PTCD3-203ENST00000409783 KYAT3Q6YP21 454 aaKnown RBP22.42■■□□□ 1.18
PTCD3-203ENST00000409783 KLHDC8BQ8IXV7 354 aa22.42■■□□□ 1.18
PTCD3-203ENST00000409783 FAM71DQ8N9W8 422 aa22.42■■□□□ 1.18
PTCD3-203ENST00000409783 OR13H1Q8NG92 308 aa22.42■■□□□ 1.18
PTCD3-203ENST00000409783 RTP4Q96DX8 246 aa22.42■■□□□ 1.18
PTCD3-203ENST00000409783 MRGPRX2Q96LB1 330 aa22.42■■□□□ 1.18
PTCD3-203ENST00000409783 FERMT1Q9BQL6 677 aa22.42■■□□□ 1.18
PTCD3-203ENST00000409783 IL21RQ9HBE5 538 aa22.42■■□□□ 1.18
PTCD3-203ENST00000409783 DNAAF2Q9NVR5 837 aaKnown RBP22.42■■□□□ 1.18
PTCD3-203ENST00000409783 RSPH14Q9UHP6 348 aa22.42■■□□□ 1.18
PTCD3-203ENST00000409783 CABIN1Q9Y6J0 2220 aa22.42■■□□□ 1.18
PTCD3-203ENST00000409783 LOC285095A0A1B0GVY8 99 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 C4orf47A7E2U8 309 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 LZTS3O60299 673 aaPredicted RBP22.41■■□□□ 1.18
PTCD3-203ENST00000409783 OPHN1O60890 802 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 NFKBIAP25963 317 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 EPHB1P54762 984 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 WNT3AP56704 352 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 C21orf59P57076 290 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 GALNT3Q14435 633 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 CCNG2Q16589 344 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 ZNF423Q2M1K9 1284 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 ITPRIPL1Q6GPH6 555 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 IL27RAQ6UWB1 636 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 KDELC2Q7Z4H8 507 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 NDUFAF2Q8N183 169 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 SLC22A18ASQ8N1D0 253 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 FAM174AQ8TBP5 190 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 KLHDC7BQ96G42 594 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 PBKQ96KB5 322 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 MLPHQ9BV36 600 aaPredicted RBP22.41■■□□□ 1.18
PTCD3-203ENST00000409783 ADGRE3Q9BY15 652 aa22.41■■□□□ 1.18
PTCD3-203ENST00000409783 A6NNZ2 444 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 PSMD11O00231 422 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 FPGTO14772 594 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 GCATO75600 419 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 STK10O94804 968 aaKnown RBP22.4■■□□□ 1.18
PTCD3-203ENST00000409783 NDST3O95803 873 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 THEGLP0DJG4 465 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 PSMB4P28070 264 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 PFN3P60673 137 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 PTSQ03393 145 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 MPP3Q13368 585 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 IRF4Q15306 451 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 TPRG1LQ5T0D9 272 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 LRRC66Q68CR7 880 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 DRICH1Q6PGQ1 229 aaPredicted RBP22.4■■□□□ 1.18
PTCD3-203ENST00000409783 HSD11B1LQ7Z5J1 315 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 COG1Q8WTW3 980 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 SKA1Q96BD8 255 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 WDR24Q96S15 920 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 OSBPL9Q96SU4 736 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 C1QTNF7Q9BXJ2 289 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 GAREM1Q9H706 876 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 TTC7AQ9ULT0 858 aaPredicted RBP22.4■■□□□ 1.18
PTCD3-203ENST00000409783 FNDC3AQ9Y2H6 1198 aaKnown RBP22.4■■□□□ 1.18
PTCD3-203ENST00000409783 ZKSCAN5Q9Y2L8 839 aa22.4■■□□□ 1.18
PTCD3-203ENST00000409783 SLC30A4O14863 429 aa22.39■■□□□ 1.17
PTCD3-203ENST00000409783 TM4SF5O14894 197 aa22.39■■□□□ 1.17
PTCD3-203ENST00000409783 EPOP01588 193 aa22.39■■□□□ 1.17
PTCD3-203ENST00000409783 ATXN1LP0C7T5 689 aaKnown RBP22.39■■□□□ 1.17
PTCD3-203ENST00000409783 MSNP26038 577 aaKnown RBP22.39■■□□□ 1.17
PTCD3-203ENST00000409783 ATXN3P54252 364 aaPredicted RBP22.39■■□□□ 1.17
PTCD3-203ENST00000409783 LRRC14Q15048 493 aa22.39■■□□□ 1.17
PTCD3-203ENST00000409783 ACOX1Q15067 660 aa22.39■■□□□ 1.17
PTCD3-203ENST00000409783 LONRF2Q1L5Z9 754 aa22.39■■□□□ 1.17
PTCD3-203ENST00000409783 RSPO4Q2I0M5 234 aaPredicted RBP22.39■■□□□ 1.17
PTCD3-203ENST00000409783 Q6ZSR6 202 aa22.39■■□□□ 1.17
PTCD3-203ENST00000409783 TECPR1Q7Z6L1 1165 aa22.39■■□□□ 1.17
PTCD3-203ENST00000409783 MAIP1Q8WWC4 291 aa22.39■■□□□ 1.17
PTCD3-203ENST00000409783 RMDN1Q96DB5 314 aa22.39■■□□□ 1.17
PTCD3-203ENST00000409783 MS4A14Q96JA4 679 aa22.39■■□□□ 1.17
PTCD3-203ENST00000409783 ERVMER34-1Q9H9K5 563 aa22.39■■□□□ 1.17
PTCD3-203ENST00000409783 SNX12Q9UMY4 172 aa22.39■■□□□ 1.17
PTCD3-203ENST00000409783 DNAH14Q0VDD8 3507 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms