RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 MAGEA13PA6NCF6 341 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 TMEM202A6NGA9 273 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 TTC36A6NLP5 189 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 HNRNPCL2B2RXH8 293 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 PLRG1O43660 514 aaKnown RBP4.14□□□□□ -1.75
PMS1-203ENST00000409593 DDNO94850 711 aaPredicted RBP4.14□□□□□ -1.75
PMS1-203ENST00000409593 CYC1P08574 325 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 ABCD3P28288 659 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 CTCFP49711 727 aaPredicted RBP4.14□□□□□ -1.75
PMS1-203ENST00000409593 SORDQ00796 357 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 ECT2LQ008S8 904 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 POU3F1Q03052 451 aaPredicted RBP4.14□□□□□ -1.75
PMS1-203ENST00000409593 OASLQ15646 514 aaKnown RBP4.14□□□□□ -1.75
PMS1-203ENST00000409593 BAK1Q16611 211 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 EIF2S3LQ2VIR3 472 aaKnown RBP4.14□□□□□ -1.75
PMS1-203ENST00000409593 SGO1Q5FBB7 561 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 WBP2NLQ6ICG8 309 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 MTSS1LQ765P7 747 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 EXOC8Q8IYI6 725 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 HUS1BQ8NHY5 278 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 TANKQ92844 425 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 PABPC5Q96DU9 382 aaKnown RBP4.14□□□□□ -1.75
PMS1-203ENST00000409593 TKTL2Q9H0I9 626 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 VPS33BQ9H267 617 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 GPR108Q9NPR9 543 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 FBXO9Q9UK97 447 aaPredicted RBP4.14□□□□□ -1.75
PMS1-203ENST00000409593 SLC13A4Q9UKG4 626 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 KCNS2Q9ULS6 477 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 VDAC3Q9Y277 283 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 STON1Q9Y6Q2 735 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 SCINQ9Y6U3 715 aa4.14□□□□□ -1.75
PMS1-203ENST00000409593 NPHP1O15259 732 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 TIPRLO75663 272 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 LINC00271P0C7V0 271 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 ABCD1P33897 745 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 SHMT1P34896 483 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 GNAQP50148 359 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 POU5F1BQ06416 359 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 CTF1Q16619 201 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 GORABQ5T7V8 394 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 ANKRD54Q6NXT1 300 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 UNQ6126/PRO20091Q6UXV3 157 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 SLC36A4Q6YBV0 504 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 CCNI2Q6ZMN8 369 aaPredicted RBP4.13□□□□□ -1.75
PMS1-203ENST00000409593 Q6ZTC4 211 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 LINGO2Q7L985 606 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 SLC46A3Q7Z3Q1 461 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 CUZD1Q86UP6 607 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 CADM4Q8NFZ8 388 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 GLIS2Q9BZE0 524 aaPredicted RBP4.13□□□□□ -1.75
PMS1-203ENST00000409593 ESRP2Q9H6T0 727 aaKnown RBP4.13□□□□□ -1.75
PMS1-203ENST00000409593 MKKSQ9NPJ1 570 aaPredicted RBP4.13□□□□□ -1.75
PMS1-203ENST00000409593 WASH6PQ9NQA3 447 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 TXLNGQ9NUQ3 528 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 KCNG2Q9UJ96 466 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 CAMK2AQ9UQM7 478 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 CRYL1Q9Y2S2 319 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 A0A0G2JPF8 293 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 HNRNPCL3B7ZW38 293 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 SEC14L5O43304 696 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 HNRNPCL1O60812 293 aaKnown RBP4.13□□□□□ -1.75
PMS1-203ENST00000409593 HNRNPCL4P0DMR1 293 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 TUBP50607 506 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 ZNF155Q12901 538 aaPredicted RBP4.13□□□□□ -1.75
PMS1-203ENST00000409593 SLC45A4Q5BKX6 768 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 HIST2H2BCQ6DN03 193 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 HIST2H2BDQ6DRA6 164 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 TAOK1Q7L7X3 1001 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 SFR1Q86XK3 245 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 POC1AQ8NBT0 407 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 PPM1EQ8WY54 764 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 TMEM19Q96HH6 336 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 NDST4Q9H3R1 872 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 PLEKHA4Q9H4M7 779 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 TCF7L2Q9NQB0 619 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 DONSONQ9NYP3 566 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 TINAGQ9UJW2 476 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 ERVK-11Q9UQG0 969 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 PSAT1Q9Y617 370 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 CYP46A1Q9Y6A2 500 aa4.13□□□□□ -1.75
PMS1-203ENST00000409593 IGHV4OR15-8A0A075B7B6 117 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 LRRC53A6NM62 1247 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 PRAC2D3DTV9 90 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 RFPL2O75678 378 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 SEC31AO94979 1220 aaKnown RBP4.12□□□□□ -1.75
PMS1-203ENST00000409593 F9P00740 461 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 SRCP12931 536 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 GABRB2P47870 512 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 DLX5P56178 289 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 NAE1Q13564 534 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 C2orf68Q2NKX9 166 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 FAM122CQ6P4D5 195 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 KRBA2Q6ZNG9 492 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 QSOX2Q6ZRP7 698 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 EXOC3L1Q86VI1 746 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 RFLNBQ8N5W9 214 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 ZNF441Q8N8Z8 693 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 NFKBIDQ8NI38 313 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 SORCS1Q8WY21 1168 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 DNASE2BQ8WZ79 361 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms