RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 NR0B2Q15466 257 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 C6orf132Q5T0Z8 1188 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 TXNRD3NBQ6F5E7 133 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 ENPP7Q6UWV6 458 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 NLRP8Q86W28 1048 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 ZSWIM9Q86XI8 627 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 CBARPQ8N350 705 aaPredicted RBP14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 WDR92Q96MX6 357 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 POLR1EQ9GZS1 481 aaKnown RBP14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 NOD2Q9HC29 1040 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 ABHD10Q9NUJ1 306 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 DNPEPQ9ULA0 475 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 DOLKQ9UPQ8 538 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 PCDHGC4Q9Y5F7 938 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 AK5Q9Y6K8 562 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 ANKRD11Q6UB99 2663 aaPredicted RBP14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 GOLGA4Q13439 2230 aaKnown RBP14.58□□□□□ -0.07
NIF3L1-205ENST00000409588 A0A087WV48 116 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 YY2O15391 372 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 TCEA3O75764 348 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 NEBLO76041 1014 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 TSHRP16473 764 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 TEAD1P28347 426 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 SLC1A1P43005 524 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 RPL26P61254 145 aaKnown RBP14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 RALGDSQ12967 914 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 PEX6Q13608 980 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 TCEAL1Q15170 157 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 TPRG1LQ5T0D9 272 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 ARMC12Q5T9G4 340 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 LRRC38Q5VT99 294 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 ALG1LQ6GMV1 187 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 PNCKQ6P2M8 343 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 TP53INP2Q8IXH6 220 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 SLC35G2Q8TBE7 412 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 IFI44Q8TCB0 444 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 MAML1Q92585 1016 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 FAF2Q96CS3 445 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 NHEJ1Q9H9Q4 299 aaPredicted RBP14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 KLQ9UEF7 1012 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 RPL26L1Q9UNX3 145 aaKnown RBP14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 COQ6Q9Y2Z9 468 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 GPSM3Q9Y4H4 160 aa14.58□□□□□ -0.08
NIF3L1-205ENST00000409588 CFAP47Q6ZTR5 3102 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 LY6G6EA0A0G2JKS1 128 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 TMX2-CTNND1H3BSU7 103 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 GCATO75600 419 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 MTA2O94776 668 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 PGLSO95336 258 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 CPP00450 1065 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 PYGLP06737 847 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 ZFXP17010 805 aaPredicted RBP14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 KDELR1P24390 212 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 VIPR1P32241 457 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 ACTN2P35609 894 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 ARHGEF7Q14155 803 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 ACOX1Q15067 660 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 DEFB133Q30KQ1 61 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 DMRTA1Q5VZB9 504 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 USP45Q70EL2 814 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 HID1Q8IV36 788 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 PGBD5Q8N414 524 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 OR56A4Q8NGH8 313 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 PCDH19Q8TAB3 1148 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 MAPK15Q8TD08 544 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 PDCD6IPQ8WUM4 868 aaKnown RBP14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 COQ10AQ96MF6 247 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 ZNF830Q96NB3 372 aaPredicted RBP14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 MCCC1Q96RQ3 725 aaPredicted RBP14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 RBM15Q96T37 977 aaKnown RBP eCLIP14.57□□□□□ -0.089e-7■■■■□ 19.6
NIF3L1-205ENST00000409588 LRRC61Q9BV99 259 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 MAK16Q9BXY0 300 aaKnown RBP14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 BRD8Q9H0E9 1235 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 PADI4Q9UM07 663 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 U3KQA8 63 aa14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 DSPP15924 2871 aaKnown RBP14.57□□□□□ -0.08
NIF3L1-205ENST00000409588 AKR1B15C9JRZ8 316 aaPredicted RBP14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 RRP8O43159 456 aaKnown RBP14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 MFAP3LO75121 409 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 HEXIM1O94992 359 aaKnown RBP14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 CD48P09326 243 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 CCNB1P14635 433 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 ZNF30P17039 623 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 DPTQ07507 201 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 ITKQ08881 620 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 ALG11Q2TAA5 492 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 ZFYVE27Q5T4F4 411 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 NCBP2-AS2Q69YL0 99 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 SARM1Q6SZW1 724 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 BZW1Q7L1Q6 419 aaKnown RBP14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 RBFAQ8N0V3 343 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 ARL10Q8N8L6 244 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 FGF11Q92914 225 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 HDAC11Q96DB2 347 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 RNF157Q96PX1 679 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 CLPBQ9H078 707 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 WDR26Q9H7D7 661 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 PHPT1Q9NRX4 125 aaPredicted RBP14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 RBM22Q9NW64 420 aaKnown RBP eCLIP14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 B4GALT6Q9UBX8 382 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms