RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 SIX1Q15475 284 aaPredicted RBP12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 OTUD1Q5VV17 481 aaPredicted RBP12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 FOXR1Q6PIV2 292 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 ZNF683Q8IZ20 524 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 ARFGAP2Q8N6H7 521 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 GRIN3AQ8TCU5 1115 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 MAIP1Q8WWC4 291 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 SLCO2A1Q92959 643 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 MAGOHBQ96A72 148 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 CPXM1Q96SM3 734 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 KLF6Q99612 283 aaPredicted RBP12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 DUSP23Q9BVJ7 150 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 MUC3BQ9H195 1237 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 TMPRSS4Q9NRS4 437 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 ACTL7AQ9Y615 435 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 WASF2Q9Y6W5 498 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 SPTY2D1-AS1A0A0U1RR47 76 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 EME2A4GXA9 379 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 THAP12O43422 761 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 CLDN11O75508 207 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 SLC2A3P11169 496 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 NME1P15531 152 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 FLT3P36888 993 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 COILP38432 576 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 CDH4P55283 916 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 DHX9Q08211 1270 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 EIF2B5Q13144 721 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 LINC00303Q3SY05 128 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 ZCCHC8Q6NZY4 707 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 AADACL2Q6P093 401 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 ZDHHC24Q6UX98 284 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 KYAT3Q6YP21 454 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 DPY19L3Q6ZPD9 716 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 MON1BQ7L1V2 547 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 RBFAQ8N0V3 343 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 UBLCP1Q8WVY7 318 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 C18orf8Q96DM3 657 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 TRIM62Q9BVG3 475 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 HDAC8Q9BY41 377 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 SLC17A9Q9BYT1 436 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 TRIM4Q9C037 500 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 USP29Q9HBJ7 922 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 IL36AQ9UHA7 158 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 ANAPC7Q9UJX3 599 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 PCDHGA8Q9Y5G5 932 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 AQP9O43315 295 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 GCATO75600 419 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 TNFSF15O95150 251 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 PRNPP04156 253 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 RHOCP08134 193 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 NSFP46459 744 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 NFKB2Q00653 900 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 C1orf61Q13536 156 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 PDE1CQ14123 709 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 KCTD16Q68DU8 428 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 TTC27Q6P3X3 843 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 C22orf39Q6P5X5 142 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 CCDC81Q6ZN84 652 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 FAM183BPQ6ZVS7 135 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 SYDE1Q6ZW31 735 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 PHF13Q86YI8 300 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 DCP2Q8IU60 420 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 OR7D4Q8NG98 312 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 LMX1AQ8TE12 382 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 BTBD6Q96KE9 485 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 LRRC19Q9H756 370 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 DYRK4Q9NR20 520 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 GRHL1Q9NZI5 618 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 GGT7Q9UJ14 662 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 FARP1Q9Y4F1 1045 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 FADS3Q9Y5Q0 445 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 CSNK1G3Q9Y6M4 447 aa12.85□□□□□ -0.35
CHRNA1-205ENST00000409542 FAM170AA1A519 330 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 IGLON5A6NGN9 336 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 MYO1FO00160 1098 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 MUSKO15146 869 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 PROSCO94903 275 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 NUDT17P0C025 328 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 RARAP10276 462 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 ADRB3P13945 408 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 JUNDP17535 347 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 GNA15P30679 374 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 MAN1A1P33908 653 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 NOMO3P69849 1222 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 NFATC3Q12968 1075 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 ARL13BQ3SXY8 428 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 CCDC137Q6PK04 289 aaKnown RBP12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 RBM44Q6ZP01 1051 aaKnown RBP12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 PRICKLE2Q7Z3G6 844 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 TFAP2DQ7Z6R9 452 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 CLEC14AQ86T13 490 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 PARGQ86W56 976 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 CPNE8Q86YQ8 564 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 PASD1Q8IV76 773 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 SLC35F3Q8IY50 421 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 VOPP1Q96AW1 172 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 TRIM31Q9BZY9 425 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 PIGVQ9NUD9 493 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 ASNSD1Q9NWL6 643 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 MPP6Q9NZW5 540 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms