RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 USP30Q70CQ3 517 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 USP45Q70EL2 814 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 PARS2Q7L3T8 475 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 TTC7BQ86TV6 843 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 SLC25A41Q8N5S1 370 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 PIH1D2Q8WWB5 315 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 ART4Q93070 314 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 ARRDC3Q96B67 414 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 TOE1Q96GM8 510 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 OMDQ99983 421 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 GRHL1Q9NZI5 618 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 PPIL1Q9Y3C6 166 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 THADAQ6YHU6 1953 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 TCRBV7S3A2A0A539 114 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 ESYT3A0FGR9 886 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 SLC7A4O43246 635 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 USP12O75317 370 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 TMEM63AO94886 807 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 ATXN1LP0C7T5 689 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 ADRB3P13945 408 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 ELP6Q0PNE2 266 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 GALNT3Q14435 633 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 POM121L1PQ3SYA9 428 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 ERAP2Q6P179 960 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 CACUL1Q86Y37 369 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 HDDC3Q8N4P3 179 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 DEFB119Q8N690 84 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 OR52K1Q8NGK4 314 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 GANCQ8TET4 914 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 APOL2Q9BQE5 337 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 FOXP3Q9BZS1 431 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 CASS4Q9NQ75 786 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 GDF3Q9NR23 364 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 FBXL12Q9NXK8 326 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 HACD3Q9P035 362 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 FZD4Q9ULV1 537 aa16.58■□□□□ 0.24
TSPAN4-208ENST00000409531 A0A0J9YYE9 177 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 A0A1W2PP55 124 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 PPFIA2O75334 1257 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 RNASEH2AO75792 299 aaKnown RBP16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 TRBC1P01850 177 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 CYP2A6P11509 494 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 TIMP2P16035 220 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 MCM3P25205 808 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 DRD3P35462 400 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 DPP6P42658 865 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 NPY2RP49146 381 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 PLTPP55058 493 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 CNTN1Q12860 1018 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 LAMB3Q13751 1172 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 HLTFQ14527 1009 aaKnown RBP eCLIP16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 CCDC6Q16204 474 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 QPCTQ16769 361 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 ARMC3Q5W041 872 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 LYSMD4Q5XG99 296 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 DENND5AQ6IQ26 1287 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 CYP2U1Q7Z449 544 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 ZSWIM9Q86XI8 627 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 PDIK1LQ8N165 341 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 AADATQ8N5Z0 425 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 EIF1ADQ8N9N8 165 aaKnown RBP16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 CADM4Q8NFZ8 388 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 IFT81Q8WYA0 676 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 PIGKQ92643 395 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 FOXJ1Q92949 421 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 SCRN2Q96FV2 425 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 SERPINB12Q96P63 405 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 GPR174Q9BXC1 333 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 TSPYL1Q9H0U9 437 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 TRABDQ9H4I3 376 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 MAGEE1Q9HCI5 957 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 BFARQ9NZS9 450 aa16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 MTRF1LQ9UGC7 380 aaKnown RBP16.57■□□□□ 0.24
TSPAN4-208ENST00000409531 PLXND1Q9Y4D7 1925 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 DCHS1Q96JQ0 3298 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 CAPN8A6NHC0 703 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 GOLGA8MH3BSY2 632 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 TUBBP07437 444 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 CHRNA4P43681 627 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 METAP1P53582 386 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 ARL4CP56559 192 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 OLIG2Q13516 323 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 HIF1AQ16665 826 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 DNAJC21Q5F1R6 531 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 PRR23CQ6ZRP0 262 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 CEP128Q6ZU80 1094 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 ARMCX6Q7L4S7 300 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 FAM124AQ86V42 546 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 SYT12Q8IV01 421 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 SLC41A1Q8IVJ1 513 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 FBXO25Q8TCJ0 367 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 FAM131CQ96AQ9 280 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 MCCC1Q96RQ3 725 aaPredicted RBP16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 LYSMD1Q96S90 227 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 IL22Q9GZX6 179 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 PCDH12Q9NPG4 1184 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 RALGAPA1Q6GYQ0 2036 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 MYLKQ15746 1914 aa16.56■□□□□ 0.24
TSPAN4-208ENST00000409531 TRPM6Q9BX84 2022 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms