RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 GALNT3Q14435 633 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 MAPRE2Q15555 327 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 MRNIPQ6NTE8 343 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 ZFP1Q6P2D0 407 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 RNF19BQ6ZMZ0 732 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 ISCA2Q86U28 154 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 LGI2Q8N0V4 545 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 PQLC1Q8N2U9 271 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 GPR150Q8NGU9 434 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 L3HYPDHQ96EM0 354 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 ZNF599Q96NL3 588 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 PDFQ9HBH1 243 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 MARCH5Q9NX47 278 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 UBDO15205 165 aa16.87■□□□□ 0.29
NUP50-203ENST00000407019 CD3EAPO15446 510 aaKnown RBP16.87■□□□□ 0.29
NUP50-203ENST00000407019 ALDH1A1P00352 501 aa16.87■□□□□ 0.29
NUP50-203ENST00000407019 EPOP01588 193 aa16.87■□□□□ 0.29
NUP50-203ENST00000407019 UQCRBP14927 111 aa16.87■□□□□ 0.29
NUP50-203ENST00000407019 NFKB2Q00653 900 aa16.87■□□□□ 0.29
NUP50-203ENST00000407019 ZNF678Q5SXM1 525 aa16.87■□□□□ 0.29
NUP50-203ENST00000407019 OGFRL1Q5TC84 451 aaPredicted RBP16.87■□□□□ 0.29
NUP50-203ENST00000407019 TMA16Q96EY4 203 aaKnown RBP16.87■□□□□ 0.29
NUP50-203ENST00000407019 MRPL1Q9BYD6 325 aaKnown RBP16.87■□□□□ 0.29
NUP50-203ENST00000407019 UTP6Q9NYH9 597 aaKnown RBP16.87■□□□□ 0.29
NUP50-203ENST00000407019 CCDC162PA2VCL2 907 aa16.87■□□□□ 0.29
NUP50-203ENST00000407019 SMIM24O75264 130 aa16.87■□□□□ 0.29
NUP50-203ENST00000407019 SUPT7LO94864 414 aa16.87■□□□□ 0.29
NUP50-203ENST00000407019 VNN2O95498 520 aa16.87■□□□□ 0.29
NUP50-203ENST00000407019 ZDHHC11BP0C7U3 371 aa16.87■□□□□ 0.29
NUP50-203ENST00000407019 GRAMD1BQ3KR37 738 aa16.87■□□□□ 0.29
NUP50-203ENST00000407019 ZNF549Q6P9A3 640 aa16.87■□□□□ 0.29
NUP50-203ENST00000407019 RSPO2Q6UXX9 243 aaPredicted RBP16.87■□□□□ 0.29
NUP50-203ENST00000407019 BRSK1Q8TDC3 778 aa16.87■□□□□ 0.29
NUP50-203ENST00000407019 ELAC1Q9H777 363 aaKnown RBP16.87■□□□□ 0.29
NUP50-203ENST00000407019 ABT1Q9ULW3 272 aaKnown RBP16.87■□□□□ 0.29
NUP50-203ENST00000407019 MTF2Q9Y483 593 aaPredicted RBP16.87■□□□□ 0.29
NUP50-203ENST00000407019 TRAF6Q9Y4K3 522 aa16.87■□□□□ 0.29
NUP50-203ENST00000407019 STX16-NPEPL1H3BU86 382 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 RNASEH1O60930 286 aaKnown RBP16.86■□□□□ 0.29
NUP50-203ENST00000407019 GPC4O75487 556 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 ALDH2P05091 517 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 SERPINF2P08697 491 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 CD1DP15813 335 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 OGNP20774 298 aaKnown RBP16.86■□□□□ 0.29
NUP50-203ENST00000407019 ALDH1A3P47895 512 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 KCNC1P48547 511 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 KCNQ1P51787 676 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 RPL26P61254 145 aaKnown RBP16.86■□□□□ 0.29
NUP50-203ENST00000407019 MRPS22P82650 360 aaKnown RBP16.86■□□□□ 0.29
NUP50-203ENST00000407019 SMARCB1Q12824 385 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 FASTKQ14296 549 aaKnown RBP16.86■□□□□ 0.29
NUP50-203ENST00000407019 PTPRCAPQ14761 206 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 FUT10Q6P4F1 479 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 CFAP52Q8N1V2 620 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 BBS5Q8N3I7 341 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 BHLHE22Q8NFJ8 381 aaPredicted RBP16.86■□□□□ 0.29
NUP50-203ENST00000407019 OR13C4Q8NGS5 318 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 SH3RF2Q8TEC5 729 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 GIPC2Q8TF65 315 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 DLG3Q92796 817 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 PTERQ96BW5 349 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 POPDC3Q9HBV1 291 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 TRPC7Q9HCX4 862 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 CATSPERZQ9NTU4 200 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 SPATS2LQ9NUQ6 558 aaKnown RBP16.86■□□□□ 0.29
NUP50-203ENST00000407019 RIMKLBQ9ULI2 386 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 DTNAQ9Y4J8 743 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 ASB3Q9Y575 518 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 PCDHB7Q9Y5E2 793 aa16.86■□□□□ 0.29
NUP50-203ENST00000407019 PSMD12O00232 456 aaPredicted RBP16.85■□□□□ 0.29
NUP50-203ENST00000407019 UBFD1O14562 309 aaKnown RBP16.85■□□□□ 0.29
NUP50-203ENST00000407019 TRPA1O75762 1119 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 BCAS2O75934 225 aaPredicted RBP16.85■□□□□ 0.29
NUP50-203ENST00000407019 NDST3O95803 873 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 ARSAP15289 507 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 SLC11A1P49279 550 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 GATMP50440 423 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 SUOXP51687 545 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 HERVK_113P63132 956 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 MS4A2Q01362 244 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 DUSP4Q13115 394 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 STX5Q13190 355 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 MED21Q13503 144 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 PTK2BQ14289 1009 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 SEMA3AQ14563 771 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 PPP1R3AQ16821 1122 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 C5orf22Q49AR2 442 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 ALG1LQ6GMV1 187 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 LRRC8DQ7L1W4 858 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 RNF148Q8N7C7 305 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 ICA1LQ8NDH6 482 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 OR52K2Q8NGK3 314 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 HMGCLL1Q8TB92 370 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 CASD1Q96PB1 797 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 TUBGCP5Q96RT8 1024 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 ERVK-6Q9BXR3 956 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 SLC38A8A6NNN8 435 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 H7C4K7 107 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 TRIM38O00635 465 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 TBC1D4O60343 1298 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms