RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 BEST2Q8NFU1 509 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 SEMA6DQ8NFY4 1073 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 GSDMBQ8TAX9 411 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 NSMCE1Q8WV22 266 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 NELL1Q92832 810 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 SLC22A18Q96BI1 424 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 PABPC5Q96DU9 382 aaKnown RBP4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 VCPIP1Q96JH7 1222 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 OR10A4Q9H209 315 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 ERVMER34-1Q9H9K5 563 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 CCDC177Q9NQR7 707 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 ANKRD10Q9NXR5 420 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 NDRG3Q9UGV2 375 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 UTS2RQ9UKP6 389 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 NENFQ9UMX5 172 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 MAGED1Q9Y5V3 778 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 KDM5BQ9UGL1 1544 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 KDM6BO15054 1643 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 DNMT1P26358 1616 aaKnown RBP4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 ADGRL2O95490 1459 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 A0A0U1RQF3 1178 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 LRRC72A6NJI9 287 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 AKR1B15C9JRZ8 316 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 OVOL3O00110 214 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 MASP2O00187 686 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 TOP3BO95985 862 aaKnown RBP4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 WNT1P04628 370 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 ETFAP13804 333 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 SRD5A1P18405 259 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 PON1P27169 355 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 CERS1P27544 350 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 CHATP28329 748 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 CAPZA2P47755 286 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 LIG4P49917 911 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 PMS2P54278 862 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 GALCP54803 685 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 ELLP55199 621 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 ROR1Q01973 937 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 CFHR1Q03591 330 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 TNFAIP1Q13829 316 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 BAATQ14032 418 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 PCLAFQ15004 111 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 KYNUQ16719 465 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 COL28A1Q2UY09 1125 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 CXorf66Q5JRM2 361 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 ENTPD8Q5MY95 495 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 KIAA1614Q5VZ46 1190 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 IGFL4Q6B9Z1 124 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 KRT80Q6KB66 452 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 OLFML1Q6UWY5 402 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 CRELD2Q6UXH1 353 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 Q6ZPA2 131 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 TRIM74Q86UV6 250 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 TRIM73Q86UV7 250 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 VSIG1Q86XK7 387 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 LRRC57Q8N9N7 239 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 POGLUT1Q8NBL1 392 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 BICD2Q8TD16 824 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 HASPINQ8TF76 798 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 FIZ1Q96SL8 496 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 SH2D3AQ9BRG2 576 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 WDR83Q9BRX9 315 aaKnown RBP4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 KIFC3Q9BVG8 833 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 IFIH1Q9BYX4 1025 aaKnown RBP4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 EDEM3Q9BZQ6 932 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 PLK3Q9H4B4 646 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 TASP1Q9H6P5 420 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 MAGEE1Q9HCI5 957 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 TMEM45AQ9NWC5 275 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 CWC15Q9P013 229 aaKnown RBP4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 EXO1Q9UQ84 846 aaKnown RBP4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 ERVK-11Q9UQG0 969 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 A3GALT2U3KPV4 340 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 WDR17Q8IZU2 1322 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 KAT6AQ92794 2004 aa4.89□□□□□ -1.63
HMGB3P18-201ENST00000406327 FAM90A8PA6NJQ4 464 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 UBE2CO00762 179 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 ADAM20O43506 726 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 MITFO75030 526 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 TPPPO94811 219 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 ABCB1P08183 1280 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 MMP2P08253 660 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 FAM90A13PP0C7W8 464 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 FAM90A24PP0C7X0 464 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 ITGAXP20702 1163 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 EDN2P20800 178 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 AGAP20933 346 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 TACR2P21452 398 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 CLCN5P51795 746 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 MRPS5P82675 430 aaKnown RBP4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 FOXF2Q12947 444 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 ARHGEF6Q15052 776 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 C9orf152Q5JTZ5 239 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 ARMC3Q5W041 872 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 KIAA0930Q6ICG6 404 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 LRRC8EQ6NSJ5 796 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 FBXO42Q6P3S6 717 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 ZNF793Q6ZN11 406 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 LINGO2Q7L985 606 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 MCEMP1Q8IX19 187 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms