RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CD1DP15813 335 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 NKX3-2P78367 333 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 ACAP2Q15057 778 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 PSMD5Q16401 504 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 NADK2Q4G0N4 442 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 ARMC3Q5W041 872 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 RTN4RL1Q86UN2 441 aaPredicted RBP9.88□□□□□ -0.83
MSH2-202ENST00000406134 CARM1Q86X55 608 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 CEP70Q8NHQ1 597 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 LINC01599Q8WXQ3 324 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 PSMG2Q969U7 264 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 UPF3AQ9H1J1 476 aaKnown RBP9.88□□□□□ -0.83
MSH2-202ENST00000406134 VCX3BQ9H321 246 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 MFSD1Q9H3U5 465 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 CATSPERBQ9H7T0 1116 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 IL37Q9NZH6 218 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 ACTL7AQ9Y615 435 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 LTA4HP09960 611 aaKnown RBP9.88□□□□□ -0.83
MSH2-202ENST00000406134 CYBAP13498 195 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 IMPDH1P20839 514 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 TRIM25Q14258 630 aaKnown RBP9.88□□□□□ -0.83
MSH2-202ENST00000406134 NXNQ6DKJ4 435 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 OVOS1Q6IE37 1185 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 FAM45BPQ6NSW5 357 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 TRAF7Q6Q0C0 670 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 TFAP2DQ7Z6R9 452 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 ZNF280BQ86YH2 543 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 EPHX4Q8IUS5 362 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 ST13P4Q8IZP2 240 aaPredicted RBP9.88□□□□□ -0.83
MSH2-202ENST00000406134 AHI1Q8N157 1196 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 OR52K2Q8NGK3 314 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 FAM45AQ8TCE6 357 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 LRTOMTQ8WZ04 291 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 DLG3Q92796 817 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 PHF21BQ96EK2 531 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 UNC93B1Q9H1C4 597 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 ABCD2Q9UBJ2 740 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 TLR6Q9Y2C9 796 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 DNAJC15Q9Y5T4 150 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 IGLV3-27P01718 113 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 ATP6V1B2P21281 511 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 PCSK6P29122 969 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 SEPT6Q14141 434 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 SQLEQ14534 574 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 NADSYN1Q6IA69 706 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 CCSAPQ6IQ19 270 aaPredicted RBP9.87□□□□□ -0.83
MSH2-202ENST00000406134 TIGD7Q6NT04 549 aaPredicted RBP9.87□□□□□ -0.83
MSH2-202ENST00000406134 CIR1Q86X95 450 aaPredicted RBP9.87□□□□□ -0.83
MSH2-202ENST00000406134 RNF135Q8IUD6 432 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 RNF34Q969K3 372 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 NSUN5Q96P11 429 aaKnown RBP9.87□□□□□ -0.83
MSH2-202ENST00000406134 SERPINI1Q99574 410 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 FSD1LQ9BXM9 530 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 TBC1D13Q9NVG8 400 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 GTSE1Q9NYZ3 720 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 LZTS1Q9Y250 596 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 FAM92AA1XBS5 289 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 TRPC5OSA6NMA1 111 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 RTN3O95197 1032 aaPredicted RBP9.87□□□□□ -0.83
MSH2-202ENST00000406134 MOCS2O96007 188 aaPredicted RBP9.87□□□□□ -0.83
MSH2-202ENST00000406134 PENKP01210 267 aaPredicted RBP9.87□□□□□ -0.83
MSH2-202ENST00000406134 SERPINH1P50454 418 aaKnown RBP9.87□□□□□ -0.83
MSH2-202ENST00000406134 CLCN5P51795 746 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 RHDQ02161 417 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 TRIM32Q13049 653 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 TUSC3Q13454 348 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 PITRM1Q5JRX3 1037 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 ZFP28Q8NHY6 868 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 TRIB3Q96RU7 358 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 PRKD2Q9BZL6 878 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 CRISPLD1Q9H336 500 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 NT5MQ9NPB1 228 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 CCDC167Q9P0B6 97 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 ZNF225Q9UK10 706 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 SCML2Q9UQR0 700 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 FIS1Q9Y3D6 152 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 ARL5AQ9Y689 179 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 HEATR9A2RTY3 570 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 ADAMTS4O75173 837 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 DUSP11O75319 330 aaKnown RBP9.87□□□□□ -0.83
MSH2-202ENST00000406134 TBX18O95935 607 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 APLP1P51693 650 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 TXNL4AP83876 142 aaKnown RBP9.87□□□□□ -0.83
MSH2-202ENST00000406134 PABPC1LQ4VXU2 614 aaKnown RBP9.87□□□□□ -0.83
MSH2-202ENST00000406134 MTX3Q5HYI7 312 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 KLHDC10Q6PID8 442 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 HACD2Q6Y1H2 254 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 SREK1Q8WXA9 508 aaKnown RBP9.87□□□□□ -0.83
MSH2-202ENST00000406134 LPGAT1Q92604 370 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 CNBD2Q96M20 576 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 KCNA7Q96RP8 456 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 ATOH8Q96SQ7 321 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 CENPKQ9BS16 269 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 SEMA6AQ9H2E6 1030 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 ALG9Q9H6U8 611 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 COQ10BQ9H8M1 238 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 APPL1Q9UKG1 709 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 CNOT6Q9ULM6 557 aaKnown RBP9.87□□□□□ -0.83
MSH2-202ENST00000406134 NEUROG3Q9Y4Z2 214 aa9.87□□□□□ -0.83
MSH2-202ENST00000406134 ST14Q9Y5Y6 855 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms