RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 LRRC38Q5VT99 294 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 TTC23Q5W5X9 447 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 HMBOX1Q6NT76 420 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 CDC42EP5Q6NZY7 148 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 DPY19L3Q6ZPD9 716 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 ANKFN1Q8N957 763 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 FAM110BQ8TC76 370 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 SGCDQ92629 289 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 ADAMTSL1Q8N6G6 1762 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 hCG_2039718K7EN88 272 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 GLDCP23378 1020 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 GABRB3P28472 473 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 POLR2IP36954 125 aaKnown RBP14.07□□□□□ -0.16
DUSP28-202ENST00000405954 EPS8Q12929 822 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 SYT16Q17RD7 645 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 SLC36A3Q495N2 470 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 AGAP6Q5VW22 663 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 STEAP3Q658P3 488 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 NAPRTQ6XQN6 538 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 AGAP4Q96P64 663 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 UQCC2Q9BRT2 126 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 HMGXB4Q9UGU5 601 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 SEPT9Q9UHD8 586 aaPredicted RBP14.07□□□□□ -0.16
DUSP28-202ENST00000405954 USP18Q9UMW8 372 aa14.07□□□□□ -0.16
DUSP28-202ENST00000405954 MEIS2O14770 477 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 POLR1CO15160 346 aaPredicted RBP14.06□□□□□ -0.16
DUSP28-202ENST00000405954 UPK1BO75841 260 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 IL1R1P14778 569 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 HARS2P49590 506 aaKnown RBP14.06□□□□□ -0.16
DUSP28-202ENST00000405954 FAM83EQ2M2I3 478 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 ZNF517Q6ZMY9 492 aaPredicted RBP14.06□□□□□ -0.16
DUSP28-202ENST00000405954 GTF2H4Q92759 462 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 FRMD8P1Q9BZ68 369 aaPredicted RBP14.06□□□□□ -0.16
DUSP28-202ENST00000405954 ZDHHC2Q9UIJ5 367 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 PSAT1Q9Y617 370 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 PDPK1O15530 556 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 HUS1O60921 280 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 THRBP10828 461 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 GLULP15104 373 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 MIPP30301 263 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 TOP3AQ13472 1001 aaPredicted RBP14.06□□□□□ -0.16
DUSP28-202ENST00000405954 AQP6Q13520 282 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 TRIP4Q15650 581 aaPredicted RBP14.06□□□□□ -0.16
DUSP28-202ENST00000405954 FAM122CQ6P4D5 195 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 CMTR2Q8IYT2 770 aaKnown RBP14.06□□□□□ -0.16
DUSP28-202ENST00000405954 GPD1LQ8N335 351 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 NECTIN4Q96NY8 510 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 SEZ6LQ9BYH1 1024 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 ASNSD1Q9NWL6 643 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 WRAP73Q9P2S5 460 aaPredicted RBP14.06□□□□□ -0.16
DUSP28-202ENST00000405954 PCDHA11Q9Y5I1 949 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 RGS13O14921 159 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 NOBOXO60393 691 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 BMP2P12643 396 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 TSPAN8P19075 237 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 INPP1P49441 399 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 GPLD1P80108 840 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 TAP1Q03518 808 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 NFYCQ13952 458 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 SPESP1Q6UW49 350 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 SH2D5Q6ZV89 423 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 PLD6Q8N2A8 252 aaKnown RBP14.06□□□□□ -0.16
DUSP28-202ENST00000405954 RYBPQ8N488 228 aaPredicted RBP14.06□□□□□ -0.16
DUSP28-202ENST00000405954 SLC7A3Q8WY07 619 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 NCLNQ969V3 563 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 CPB2Q96IY4 423 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 SNX18Q96RF0 628 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 ACO2Q99798 780 aaKnown RBP14.06□□□□□ -0.16
DUSP28-202ENST00000405954 NARFLQ9H6Q4 476 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 ABI2Q9NYB9 513 aaPredicted RBP14.06□□□□□ -0.16
DUSP28-202ENST00000405954 HSPB11Q9Y547 144 aa14.06□□□□□ -0.16
DUSP28-202ENST00000405954 SYNJ2BP-COX16A0A087WUM0 186 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 PRKCHP24723 683 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 IRF9Q00978 393 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 ORC1Q13415 861 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 SEMA3AQ14563 771 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 SKIV2LQ15477 1246 aaKnown RBP14.05□□□□□ -0.16
DUSP28-202ENST00000405954 NPTX1Q15818 432 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 HIST2H2ACQ16777 129 aaPredicted RBP14.05□□□□□ -0.16
DUSP28-202ENST00000405954 C5orf22Q49AR2 442 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 COLGALT2Q8IYK4 626 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 OR8H3Q8N146 312 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 FAM83FQ8NEG4 500 aaPredicted RBP14.05□□□□□ -0.16
DUSP28-202ENST00000405954 MCOLN3Q8TDD5 553 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 CDCA7Q9BWT1 371 aaPredicted RBP14.05□□□□□ -0.16
DUSP28-202ENST00000405954 ROGDIQ9GZN7 287 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 TAS2R9Q9NYW1 312 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 COX16Q9P0S2 106 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 SLCO3A1Q9UIG8 710 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 FZD1Q9UP38 647 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 COL22A1Q8NFW1 1626 aaPredicted RBP14.05□□□□□ -0.16
DUSP28-202ENST00000405954 PNMA8CA0A1B0GUJ8 204 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 XPNPEP2O43895 674 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 GRIN3BO60391 1043 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 SOAT2O75908 522 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 RECQL5O94762 991 aaPredicted RBP14.05□□□□□ -0.16
DUSP28-202ENST00000405954 C2P06681 752 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 OGDHQ02218 1023 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 CHRNB3Q05901 458 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 IFRD2Q12894 506 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms