RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 TEX44Q53QW1 395 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 TRIM40Q6P9F5 258 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 APTXQ7Z2E3 356 aaKnown RBP13.39□□□□□ -0.27
SNED1-205ENST00000405547 IZUMO1Q8IYV9 350 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 ARRDC4Q8NCT1 418 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 ZNF671Q8TAW3 534 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 SEMA3CQ99985 751 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 GALNT8Q9NY28 637 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 ANGPT4Q9Y264 503 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 NTRK1P04629 796 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 DBTP11182 482 aaKnown RBP13.39□□□□□ -0.27
SNED1-205ENST00000405547 CAPGP40121 348 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 LSM3P62310 102 aaKnown RBP13.39□□□□□ -0.27
SNED1-205ENST00000405547 SLC39A12Q504Y0 691 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 C6orf52Q5T4I8 152 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 CYP20A1Q6UW02 462 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 OR4L1Q8NH43 312 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.39□□□□□ -0.27
SNED1-205ENST00000405547 GRHL1Q9NZI5 618 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 UGT2B11O75310 529 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 OR6B1O95007 311 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 GPIP06744 558 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 CCNHP51946 323 aaPredicted RBP13.39□□□□□ -0.27
SNED1-205ENST00000405547 RAB15P59190 212 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 PTSQ03393 145 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 QPRTQ15274 297 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 SETMARQ53H47 684 aaPredicted RBP13.39□□□□□ -0.27
SNED1-205ENST00000405547 DCLRE1AQ6PJP8 1040 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 LCLAT1Q6UWP7 414 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 R3HCC1LQ7Z5L2 792 aaKnown RBP13.39□□□□□ -0.27
SNED1-205ENST00000405547 METTL3Q86U44 580 aaKnown RBP13.39□□□□□ -0.27
SNED1-205ENST00000405547 EURLQ9NYK6 297 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 RIMBP3CA6NJZ7 1639 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 RIMBP3BA6NNM3 1639 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 RIMBP3Q9UFD9 1639 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 AREL1O15033 823 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 RPL38P63173 70 aaKnown RBP13.39□□□□□ -0.27
SNED1-205ENST00000405547 GPR180Q86V85 440 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 MCFD2Q8NI22 146 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 FGFBP2Q9BYJ0 223 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 ADGRE2Q9UHX3 823 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 QSOX1O00391 747 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 C4BPAP04003 597 aaKnown RBP13.38□□□□□ -0.27
SNED1-205ENST00000405547 TSPAN8P19075 237 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 RCVRNP35243 200 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 SLC18A1P54219 525 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 AKAP14Q86UN6 197 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 CPXM1Q96SM3 734 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 VPS4AQ9UN37 437 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 WBP11Q9Y2W2 641 aaKnown RBP13.38□□□□□ -0.27
SNED1-205ENST00000405547 SLC22A2O15244 555 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 FESP07332 822 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 PSEN2P49810 448 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 ATG14Q6ZNE5 492 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 VN1R5Q7Z5H4 357 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 UXS1Q8NBZ7 420 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 USP7Q93009 1102 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 PANX1Q96RD7 426 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 SPON1Q9HCB6 807 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 DNMT3LQ9UJW3 386 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 MDM4O15151 490 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 GCATO75600 419 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 SLC6A2P23975 617 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 CLK2P49760 499 aaKnown RBP13.38□□□□□ -0.27
SNED1-205ENST00000405547 SLC26A9Q7LBE3 791 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 CPSF7Q8N684 471 aaKnown RBP13.38□□□□□ -0.27
SNED1-205ENST00000405547 RAD18Q9NS91 495 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 ING3Q9NXR8 418 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 YDJCA8MPS7 323 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 MTHFRP42898 656 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 SKP1P63208 163 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 CYP2A13Q16696 494 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 ZYG11AQ6WRX3 759 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 CSPG4P5Q96PW8 444 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 TDRD1Q9BXT4 1180 aaKnown RBP13.38□□□□□ -0.27
SNED1-205ENST00000405547 SLC39A8Q9C0K1 460 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 SMPD3Q9NY59 655 aaPredicted RBP13.38□□□□□ -0.27
SNED1-205ENST00000405547 TRPV2Q9Y5S1 764 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 DENND5AQ6IQ26 1287 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 PAGE2Q7Z2X7 111 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 HIPK1Q86Z02 1210 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 QKIQ96PU8 341 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNED1-205ENST00000405547 CCDC3Q9BQI4 270 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 CIDEBQ9UHD4 219 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 BTRCQ9Y297 605 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 PCSK2P16519 638 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 CXCR2P25025 360 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 ACOX1Q15067 660 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 GRIK5Q16478 980 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 PNPT1Q8TCS8 783 aaKnown RBP13.38□□□□□ -0.27
SNED1-205ENST00000405547 NADKO95544 446 aaPredicted RBP13.38□□□□□ -0.27
SNED1-205ENST00000405547 FYNP06241 537 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 MPSTP25325 297 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 RAB25P57735 213 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 PCDHB12Q9Y5F1 795 aa13.38□□□□□ -0.27
SNED1-205ENST00000405547 ANKDD1BA6NHY2 528 aa13.37□□□□□ -0.27
SNED1-205ENST00000405547 FFAR3O14843 346 aa13.37□□□□□ -0.27
SNED1-205ENST00000405547 GPR42O15529 346 aa13.37□□□□□ -0.27
SNED1-205ENST00000405547 AP2A1O95782 977 aa13.37□□□□□ -0.27
SNED1-205ENST00000405547 SLCO6A1Q86UG4 719 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms