RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 SPESP1Q6UW49 350 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 ZNF621Q6ZSS3 439 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 PIM3Q86V86 326 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 OR13C4Q8NGS5 318 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 FAM45AQ8TCE6 357 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 VPS33AQ96AX1 596 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 TPD52L3Q96J77 140 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 NR1H4Q96RI1 486 aaPredicted RBP13.73□□□□□ -0.21
GSE1-203ENST00000405402 GPR21Q99679 349 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 SMAD5Q99717 465 aaKnown RBP13.73□□□□□ -0.21
GSE1-203ENST00000405402 SMOQ99835 787 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 POLR1BQ9H9Y6 1135 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 TRMT13Q9NUP7 481 aaKnown RBP13.73□□□□□ -0.21
GSE1-203ENST00000405402 TMEM247A6NEH6 219 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 SORBS2O94875 1100 aaKnown RBP13.73□□□□□ -0.21
GSE1-203ENST00000405402 ZBTB11O95625 1053 aaPredicted RBP13.73□□□□□ -0.21
GSE1-203ENST00000405402 HSMCR30P0CW71 290 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 ZNF7P17097 686 aaPredicted RBP13.73□□□□□ -0.21
GSE1-203ENST00000405402 CCT8P50990 548 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 SLC18A1P54219 525 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 FAM98BQ52LJ0 330 aaKnown RBP13.73□□□□□ -0.21
GSE1-203ENST00000405402 MLPHQ9BV36 600 aaPredicted RBP13.73□□□□□ -0.21
GSE1-203ENST00000405402 FAM192AQ9GZU8 254 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 DNAJC28Q9NX36 388 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 PRKAG2Q9UGJ0 569 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 NPEPPSL1A6NEC2 478 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 J3KR12 359 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 DLX3O60479 287 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 DEAF1O75398 565 aaPredicted RBP13.73□□□□□ -0.21
GSE1-203ENST00000405402 SNAI1O95863 264 aaPredicted RBP13.73□□□□□ -0.21
GSE1-203ENST00000405402 HLA-DQB2P05538 268 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 ITGAXP20702 1163 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 PSMB9P28065 219 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 MC4RP32245 332 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 ROR2Q01974 943 aaKnown RBP13.73□□□□□ -0.21
GSE1-203ENST00000405402 UBE3AQ05086 875 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 STARD3Q14849 445 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 MAPK11Q15759 364 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 GSTA3Q16772 222 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 OFCC1Q8IZS5 231 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 GRIN3AQ8TCU5 1115 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 DLG3Q92796 817 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 CASP10Q92851 521 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 FOPNLQ96NB1 174 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 C6orf203Q9P0P8 240 aaPredicted RBP13.73□□□□□ -0.21
GSE1-203ENST00000405402 SCHIP1Q9P0W5 487 aaPredicted RBP13.73□□□□□ -0.21
GSE1-203ENST00000405402 ANAPC2Q9UJX6 822 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 PRPF19Q9UMS4 504 aaKnown RBP13.73□□□□□ -0.21
GSE1-203ENST00000405402 C10orf71Q711Q0 1435 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 COL1A2P08123 1366 aa13.73□□□□□ -0.21
GSE1-203ENST00000405402 SIPA1L3O60292 1781 aaPredicted RBP13.72□□□□□ -0.21
GSE1-203ENST00000405402 MYOCOSA0A1B0GUC4 107 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 IQCF5A8MTL0 148 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 MAP3K13O43283 966 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 GSNP06396 782 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 ATP6V1E1P36543 226 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 NOL9Q5SY16 702 aaKnown RBP13.72□□□□□ -0.21
GSE1-203ENST00000405402 CAMK1DQ8IU85 385 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 C19orf60Q96EN9 201 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 PHF12Q96QT6 1004 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 C16orf70Q9BSU1 422 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 TRIM8Q9BZR9 551 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 CXCL16Q9H2A7 254 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 FBRSL1Q9HCM7 1045 aaKnown RBP13.72□□□□□ -0.21
GSE1-203ENST00000405402 CRTAC1Q9NQ79 661 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 RAD54BQ9Y620 910 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 ARL5AQ9Y689 179 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 RAD51BO15315 384 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 LRG1P02750 347 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 GSCP56915 257 aaPredicted RBP13.72□□□□□ -0.21
GSE1-203ENST00000405402 CLDN10P78369 228 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 PPP1R8Q12972 351 aaKnown RBP13.72□□□□□ -0.21
GSE1-203ENST00000405402 GPR107Q5VW38 600 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 MBLAC2Q68D91 279 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 ZDHHC13Q8IUH4 622 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 SKA1Q96BD8 255 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 OPTCQ9UBM4 332 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 INVSQ9Y283 1065 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 MATN3O15232 486 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 GCAP28676 217 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 CCNFP41002 786 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 GLUD2P49448 558 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 GPR15P49685 360 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 TCEA2Q15560 299 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 ARMC12Q5T9G4 340 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 RETSATQ6NUM9 610 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 NECAB2Q7Z6G3 386 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 APLFQ8IW19 511 aaPredicted RBP13.72□□□□□ -0.21
GSE1-203ENST00000405402 TMCO5AQ8N6Q1 288 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 KANSL3Q9P2N6 904 aa13.72□□□□□ -0.21
GSE1-203ENST00000405402 RGS17Q9UGC6 210 aaPredicted RBP13.72□□□□□ -0.21
GSE1-203ENST00000405402 E7ESA3 106 aa13.71□□□□□ -0.21
GSE1-203ENST00000405402 H7C4K7 107 aa13.71□□□□□ -0.21
GSE1-203ENST00000405402 TRAFD1O14545 582 aaPredicted RBP13.71□□□□□ -0.21
GSE1-203ENST00000405402 HNRNPRO43390 633 aaKnown RBP13.71□□□□□ -0.21
GSE1-203ENST00000405402 SMAD3P84022 425 aaKnown RBP13.71□□□□□ -0.21
GSE1-203ENST00000405402 SREBF2Q12772 1141 aa13.71□□□□□ -0.21
GSE1-203ENST00000405402 TSNQ15631 228 aaKnown RBP13.71□□□□□ -0.21
GSE1-203ENST00000405402 BRMS1LQ5PSV4 323 aa13.71□□□□□ -0.21
GSE1-203ENST00000405402 B3GNT6Q6ZMB0 384 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms