RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 FGF22Q9HCT0 170 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 CTTNBP2NLQ9P2B4 639 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 PCDHGC4Q9Y5F7 938 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.42■□□□□ 0.061e-6■■■□□ 19.1
TPM1-207ENST00000403994 GCN1Q92616 2671 aaKnown RBP15.42■□□□□ 0.06
TPM1-207ENST00000403994 A8MX80 341 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 USP12O75317 370 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 PROSCO94903 275 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 MPOP05164 745 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 HOXB3P14651 431 aaPredicted RBP15.41■□□□□ 0.06
TPM1-207ENST00000403994 LHCGRP22888 699 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 EIF2S3P41091 472 aaKnown RBP15.41■□□□□ 0.06
TPM1-207ENST00000403994 RPIAP49247 311 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 GABREP78334 506 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 GALNT2Q10471 571 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 TRIM14Q14142 442 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 SLC18A3Q16572 532 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 HADHQ16836 314 aaKnown RBP15.41■□□□□ 0.06
TPM1-207ENST00000403994 NCBP2-AS2Q69YL0 99 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 RD3Q7Z3Z2 195 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 PELI3Q8N2H9 469 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 NSMCE1Q8WV22 266 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 OR1E3Q8WZA6 343 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 NUS1Q96E22 293 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 COQ10AQ96MF6 247 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 RBM15Q96T37 977 aaKnown RBP eCLIP15.41■□□□□ 0.062e-7■■□□□ 13.8
TPM1-207ENST00000403994 ZNF670Q9BS34 389 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 WDR26Q9H7D7 661 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 SIRPGQ9P1W8 387 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 UVRAGQ9P2Y5 699 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 DOLKQ9UPQ8 538 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 DGKBQ9Y6T7 804 aa15.41■□□□□ 0.06
TPM1-207ENST00000403994 A0A1W2PQ67 120 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 TMEM202A6NGA9 273 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 NPIPB15A6NHN6 443 aaPredicted RBP15.4■□□□□ 0.06
TPM1-207ENST00000403994 CACNB4O00305 520 aaPredicted RBP15.4■□□□□ 0.06
TPM1-207ENST00000403994 CASC3O15234 703 aaKnown RBP15.4■□□□□ 0.06
TPM1-207ENST00000403994 HEXIM1O94992 359 aaKnown RBP15.4■□□□□ 0.06
TPM1-207ENST00000403994 CTSEP14091 401 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 ITPKBP27987 946 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 VIPR1P32241 457 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 ACTN2P35609 894 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 GARSP41250 739 aaKnown RBP15.4■□□□□ 0.06
TPM1-207ENST00000403994 PDX1P52945 283 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 ACOX1Q15067 660 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 ISXQ2M1V0 245 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 ASTE1Q2TB18 679 aaPredicted RBP15.4■□□□□ 0.06
TPM1-207ENST00000403994 ATP13A4Q4VNC1 1196 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 RALGPS1Q5JS13 557 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 MARC1Q5VT66 337 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 SPECC1LQ69YQ0 1117 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 LVRNQ6Q4G3 990 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 RBM44Q6ZP01 1051 aaKnown RBP15.4■□□□□ 0.06
TPM1-207ENST00000403994 GKN2Q86XP6 184 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 LRRC49Q8IUZ0 686 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 OR56A4Q8NGH8 313 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 CTNNBL1Q8WYA6 563 aaPredicted RBP15.4■□□□□ 0.06
TPM1-207ENST00000403994 MCCC1Q96RQ3 725 aaPredicted RBP15.4■□□□□ 0.06
TPM1-207ENST00000403994 CCDC3Q9BQI4 270 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 NT5MQ9NPB1 228 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 PADI4Q9UM07 663 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 GPR34Q9UPC5 381 aa15.4■□□□□ 0.06
TPM1-207ENST00000403994 ARHGEF17Q96PE2 2063 aaPredicted RBP15.4■□□□□ 0.06
TPM1-207ENST00000403994 TCEA3O75764 348 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 DXOO77932 396 aaKnown RBP15.39■□□□□ 0.05
TPM1-207ENST00000403994 PGLSO95336 258 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 MAP3K6O95382 1288 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 HOXC4P09017 264 aaPredicted RBP15.39■□□□□ 0.05
TPM1-207ENST00000403994 H2AFZP0C0S5 128 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 TRIM23P36406 574 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 TAS2R40P59535 323 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 PAFAH1B3Q15102 231 aaKnown RBP15.39■□□□□ 0.05
TPM1-207ENST00000403994 ANKRD20A8PQ5CZ79 823 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 ALG1LQ6GMV1 187 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 PNCKQ6P2M8 343 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 H2AFVQ71UI9 128 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 SDR16C5Q8N3Y7 309 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 TEX26Q8N6G2 289 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 TPCN2Q8NHX9 752 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 SCG3Q8WXD2 468 aaKnown RBP15.39■□□□□ 0.05
TPM1-207ENST00000403994 FGF11Q92914 225 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 CCDC74AQ96AQ1 378 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 FAF2Q96CS3 445 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 DTD2Q96FN9 168 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 ATXN7L3BQ96GX2 97 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 LGR4Q9BXB1 951 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 POLR1BQ9H9Y6 1135 aa15.39■□□□□ 0.05
TPM1-207ENST00000403994 MRPL40Q9NQ50 206 aaKnown RBP15.39■□□□□ 0.05
TPM1-207ENST00000403994 A0A1W2PNU3 283 aaPredicted RBP15.38■□□□□ 0.05
TPM1-207ENST00000403994 SSU72P8A0A1W2PR75 194 aa15.38■□□□□ 0.05
TPM1-207ENST00000403994 PRSS38A1L453 326 aa15.38■□□□□ 0.05
TPM1-207ENST00000403994 TNFRSF10CO14798 259 aa15.38■□□□□ 0.05
TPM1-207ENST00000403994 RRP8O43159 456 aaKnown RBP15.38■□□□□ 0.05
TPM1-207ENST00000403994 CBFA2T2O43439 604 aa15.38■□□□□ 0.05
TPM1-207ENST00000403994 CYP2A6P11509 494 aaPredicted RBP15.38■□□□□ 0.05
TPM1-207ENST00000403994 MYCLP1P12525 358 aaPredicted RBP15.38■□□□□ 0.05
TPM1-207ENST00000403994 KELP23276 732 aa15.38■□□□□ 0.05
TPM1-207ENST00000403994 NFKBIAP25963 317 aa15.38■□□□□ 0.05
TPM1-207ENST00000403994 MAN1A1P33908 653 aa15.38■□□□□ 0.05
TPM1-207ENST00000403994 ETV3P41162 512 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms