RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 ARL6IP4Q66PJ3 421 aaKnown RBP5.71□□□□□ -1.5
CNGA1-202ENST00000402813 THSD4Q6ZMP0 1018 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 C15orf39Q6ZRI6 1047 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 CCDC121Q6ZUS5 278 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 SPATA19Q7Z5L4 167 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 ZNF573Q86YE8 665 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 CMTR1Q8N1G2 835 aaKnown RBP5.71□□□□□ -1.5
CNGA1-202ENST00000402813 OR8J2Q8NGG1 315 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 CD300LFQ8TDQ1 290 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 RGMAQ96B86 450 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 FAM227BQ96M60 508 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 RTKNQ9BST9 563 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 WDR11Q9BZH6 1224 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 RNF32Q9H0A6 362 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 NEK6Q9HC98 313 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 ZNF446Q9NWS9 450 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 DTLQ9NZJ0 730 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 DTX4Q9Y2E6 619 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 STARD13Q9Y3M8 1113 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 HBS1LQ9Y450 684 aaKnown RBP5.71□□□□□ -1.5
CNGA1-202ENST00000402813 CORINQ9Y5Q5 1042 aa5.71□□□□□ -1.5
CNGA1-202ENST00000402813 USP42Q9H9J4 1324 aaKnown RBP5.71□□□□□ -1.5
CNGA1-202ENST00000402813 FIGNL2A6NMB9 653 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 SLC30A4O14863 429 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 RPS6KA4O75676 772 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 PGLSO95336 258 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 FTLP02792 175 aaPredicted RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 KLKB1P03952 638 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 ABHD2P08910 425 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 CCDC166P0CW27 439 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 KITP10721 976 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 ADH6P28332 368 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 OTX2P32243 289 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 GPR4P46093 362 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 DGKEP52429 567 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 SNU13P55769 128 aaKnown RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 RAB15P59190 212 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 SELENOVP59797 346 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 GSTM4Q03013 218 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 SRSF11Q05519 484 aaKnown RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 GOLGA8FQ08AF8 430 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 GOLGA8DPQ0D2H9 430 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 IL18Q14116 193 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 SF3B4Q15427 424 aaKnown RBP eCLIP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 ARHGAP44Q17R89 818 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 KLHL38Q2WGJ6 581 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 DNAL1Q4LDG9 190 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 STRIP1Q5VSL9 837 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 SLFN13Q68D06 897 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 MPRIPQ6WCQ1 1025 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 PIK3AP1Q6ZUJ8 805 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 USP53Q70EK8 1073 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 KRT27Q7Z3Y8 459 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 CYP4X1Q8N118 509 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 FSTL5Q8N475 847 aaPredicted RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 C12orf50Q8NA57 414 aaPredicted RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 GPR156Q8NFN8 814 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 OSCP1Q8WVF1 389 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 SNX22Q96L94 193 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 CCDC140Q96MF4 163 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 ZNF558Q96NG5 402 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 TRERF1Q96PN7 1200 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 POP1Q99575 1024 aaKnown RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 NUF2Q9BZD4 464 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 RTN4RQ9BZR6 473 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 FAM192AQ9GZU8 254 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 VCX2Q9H322 139 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 ZNF576Q9H609 170 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 DHX33Q9H6R0 707 aaKnown RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 ZNF552Q9H707 407 aaPredicted RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 SMURF1Q9HCE7 757 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 ARL8BQ9NVJ2 186 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 FAM86C1Q9NVL1 165 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 ZSCAN32Q9NX65 697 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 MRPL39Q9NYK5 338 aaKnown RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 ARMCX3Q9UH62 379 aaPredicted RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 CIDEBQ9UHD4 219 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 GPN3Q9UHW5 284 aaPredicted RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 MRPS7Q9Y2R9 242 aaKnown RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 MTO1Q9Y2Z2 717 aaKnown RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 RGS12O14924 1447 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 ADAMTS7Q9UKP4 1686 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 NOP56O00567 594 aaKnown RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 SHOXO15266 292 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 EFSO43281 561 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 NOBOXO60393 691 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 NPPBP16860 134 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 HOXA9P31269 272 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 SHMT1P34896 483 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 PGM1P36871 562 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 NRIP1P48552 1158 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 CAPZA1P52907 286 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 PDE1AP54750 535 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 SNTB2Q13425 540 aaKnown RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 BAATQ14032 418 aaPredicted RBP5.7□□□□□ -1.5
CNGA1-202ENST00000402813 ZNF311Q5JNZ3 666 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 C20orf194Q5TEA3 1177 aa5.7□□□□□ -1.5
CNGA1-202ENST00000402813 MBNL2Q5VZF2 373 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms