RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 KCTD4Q8WVF5 259 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 PSPC1Q8WXF1 523 aaKnown RBP6.2□□□□□ -1.42
CLIP4-202ENST00000401605 RANBP9Q96S59 729 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 LXNQ9BS40 222 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 TMEM168Q9H0V1 697 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 LHX5Q9H2C1 402 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 DHX33Q9H6R0 707 aaKnown RBP6.2□□□□□ -1.42
CLIP4-202ENST00000401605 MVB12BQ9H7P6 319 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 PLGRKTQ9HBL7 147 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 TM9SF3Q9HD45 589 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 ITM2CQ9NQX7 267 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 GJB4Q9NTQ9 266 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 POLR3BQ9NW08 1133 aaPredicted RBP6.2□□□□□ -1.42
CLIP4-202ENST00000401605 NMRK1Q9NWW6 199 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 SLC12A4Q9UP95 1085 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 ERGIC3Q9Y282 383 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 DTX4Q9Y2E6 619 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 ZDHHC9Q9Y397 364 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 USP15Q9Y4E8 981 aaPredicted RBP6.2□□□□□ -1.42
CLIP4-202ENST00000401605 MYH7BA7E2Y1 1941 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 PTPRSQ13332 1948 aa6.2□□□□□ -1.42
CLIP4-202ENST00000401605 TTC3P53804 2025 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 REV3LO60673 3130 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 BDP1A6H8Y1 2624 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 A0A0A6YYJ9 748 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 EIF4E1BA6NMX2 242 aaKnown RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 SLCO1B7G3V0H7 640 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 PCDH17O14917 1159 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 ZNF623O75123 536 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 NME1P15531 152 aaKnown RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 GNAZP19086 355 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 KELP23276 732 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 GGCXP38435 758 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 PBX3P40426 434 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 MSH2P43246 934 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 ECT2LQ008S8 904 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 KCNC4Q03721 635 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 SPIRE1Q08AE8 756 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 PDCLQ13371 301 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 HNRNPDQ14103 355 aaKnown RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 KCNJ8Q15842 424 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 MARK2Q7KZI7 788 aaKnown RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 PRUNE1Q86TP1 453 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 TCAIMQ8N3R3 496 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 ZBTB44Q8NCP5 570 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 KCTD13Q8WZ19 329 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 LPPQ93052 612 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 NMD3Q96D46 503 aaKnown RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 TMEM169Q96HH4 297 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 NUP85Q9BW27 656 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 PHF7Q9BWX1 381 aaPredicted RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 FAM105AQ9NUU6 356 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 WWOXQ9NZC7 414 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 WRAP73Q9P2S5 460 aaPredicted RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 UVRAGQ9P2Y5 699 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 CD300AQ9UGN4 299 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 BRWD1Q9NSI6 2320 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 CTAGE15A4D2H0 777 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 TXNL1O43396 289 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 THAP12O43422 761 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 PSIP1O75475 530 aaKnown RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 JRKO75564 520 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 GOSR1O95249 250 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 HSPA4LO95757 839 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 OCM2P0CE71 109 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 OCMP0CE72 109 aaPredicted RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 CTAGE8P0CG41 777 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 FDPSP14324 419 aaKnown RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 HOXB8P17481 243 aaPredicted RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 CCNE1P24864 410 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 TYK2P29597 1187 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 HARS2P49590 506 aaKnown RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 NKX2-5P52952 324 aaPredicted RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 BCAR1P56945 870 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 RPP30P78346 268 aaKnown RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 RAD51Q06609 339 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 KCNC3Q14003 757 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 GALNT3Q14435 633 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 FSCBQ5H9T9 825 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 NOMO2Q5JPE7 1267 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 EARS2Q5JPH6 523 aaKnown RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 HAUS3Q68CZ6 603 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 ITPRIPL1Q6GPH6 555 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 GALNTL5Q7Z4T8 443 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 ASPGQ86U10 573 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 CTAGE6Q86UF2 777 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 KRT73Q86Y46 540 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 KSR1Q8IVT5 923 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 CTAGE4Q8IX94 777 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 MRPL43Q8N983 215 aaKnown RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 NECAB1Q8N987 351 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 ZNF527Q8NB42 609 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 FBXO15Q8NCQ5 510 aaPredicted RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 VN1R2Q8NFZ6 395 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 RHBDD1Q8TEB9 315 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 PRPF31Q8WWY3 499 aaKnown RBP6.19□□□□□ -1.42
CLIP4-202ENST00000401605 SUSD6Q92537 303 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 TANKQ92844 425 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 TMEM143Q96AN5 459 aa6.19□□□□□ -1.42
CLIP4-202ENST00000401605 VPS33AQ96AX1 596 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms