RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 NFYCQ13952 458 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 PLCL1Q15111 1095 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 MAPRE2Q15555 327 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 ZRANB3Q5FWF4 1079 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 ZFP1Q6P2D0 407 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 KLHDC10Q6PID8 442 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 CHST15Q7LFX5 561 aaPredicted RBP12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 MS4A4AQ96JQ5 239 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 GGT5P36269 586 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 FOXA1P55317 472 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 PPP1R8Q12972 351 aaKnown RBP12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 GRB7Q14451 532 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 CYP51A1Q16850 503 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 UGT2A3Q6UWM9 527 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 RALGPS2Q86X27 583 aaPredicted RBP12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 CBR4Q8N4T8 237 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 PCYOX1LQ8NBM8 494 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 CATSPER1Q8NEC5 780 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 RDH11Q8TC12 318 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 SKA2Q8WVK7 121 aaPredicted RBP12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 CDK15Q96Q40 435 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 AKTIPQ9H8T0 292 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 TBC1D13Q9NVG8 400 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 CACNA2D2Q9NY47 1150 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 AP3B1O00203 1094 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 GUCA1CO95843 209 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 SEMA3BQ13214 749 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 MYLK3Q32MK0 819 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 DENND5AQ6IQ26 1287 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 TIGD7Q6NT04 549 aaPredicted RBP12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 ABI1Q8IZP0 508 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 DGCR14Q96DF8 476 aaKnown RBP12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 C19orf60Q96EN9 201 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 PFDN4Q9NQP4 134 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 CD274Q9NZQ7 290 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 A0A087X1B8 175 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 CBX4O00257 560 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 BTN3A1O00481 513 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 GPR182O15218 404 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 YAP1P46937 504 aaKnown RBP12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 TWF1Q12792 350 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 FAM110CQ1W6H9 321 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 OGFRL1Q5TC84 451 aaPredicted RBP12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 TAF2Q6P1X5 1199 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 C16orf59Q7L2K0 433 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 LPCAT2Q7L5N7 544 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 ZNF280BQ86YH2 543 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 CLVS1Q8IUQ0 354 aaPredicted RBP12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 APLFQ8IW19 511 aaPredicted RBP12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 OR7D4Q8NG98 312 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 ZFP28Q8NHY6 868 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 TRMT13Q9NUP7 481 aaKnown RBP12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 ETAA1Q9NY74 926 aa12.69□□□□□ -0.38
PPP4R1-202ENST00000400555 MBLAC1A4D2B0 266 aaPredicted RBP12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 E5RI56 91 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 SNX2O60749 519 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 GOT2P00505 430 aaKnown RBP12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 CHRNA1P02708 482 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 IL10P22301 178 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 PRDX6P30041 224 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 DIO3P55073 304 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 MYBPC1Q00872 1141 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 FAM171A1Q5VUB5 890 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 ARHGAP22Q7Z5H3 698 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 SLC25A23Q9BV35 468 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 SMPD4Q9NXE4 827 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 RRN3Q9NYV6 651 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 MARCH2Q9P0N8 246 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 AFF4Q9UHB7 1163 aaKnown RBP12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 ZMYM5Q9UJ78 669 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 CCDC162PA2VCL2 907 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 CASQ2O14958 399 aaPredicted RBP12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 MGEA5O60502 916 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 ALOX15P16050 662 aaPredicted RBP12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 EEF1DP29692 281 aaKnown RBP12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 GALK1P51570 392 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 SEMG2Q02383 582 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 NEDD8Q15843 81 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 CTXN3Q4LDR2 81 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 TIGD2Q4W5G0 525 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 RABL3Q5HYI8 236 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 SIRPB2Q5JXA9 342 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 LGI2Q8N0V4 545 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 CDYL2Q8N8U2 506 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 MAGEE2Q8TD90 523 aaPredicted RBP12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 NUDT8Q8WV74 236 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 SENP6Q9GZR1 1112 aaPredicted RBP12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 FAM124BQ9H5Z6 455 aaPredicted RBP12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 NDUFAF1Q9Y375 327 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 ZNF646O15015 1829 aaPredicted RBP12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 MOXD2PA6NHM9 499 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 CD3EAPO15446 510 aaKnown RBP12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 BCAS2O75934 225 aaPredicted RBP12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 TFAP2AP05549 437 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 ZNF23P17027 643 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 ARCN1P48444 511 aaKnown RBP12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 USP46P62068 366 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 UPP1Q16831 310 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 LDLRAD1Q5T700 205 aa12.68□□□□□ -0.38
PPP4R1-202ENST00000400555 GLB1LQ6UWU2 654 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms