RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 C6orf203Q9P0P8 240 aaPredicted RBP13.54□□□□□ -0.24
SIRPA-203ENST00000400068 DOCK3Q8IZD9 2030 aa13.54□□□□□ -0.24
SIRPA-203ENST00000400068 A0A0D9SEW6 157 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 STX16-NPEPL1H3BU86 382 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 RGS4P49798 205 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 USP41Q3LFD5 358 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 ATXN7L2Q5T6C5 722 aaPredicted RBP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 ANKS6Q68DC2 871 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 SZRD1Q7Z422 152 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 ZC3HC1Q86WB0 502 aaKnown RBP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 LINC01465Q8N7H1 131 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 ACVR1CQ8NER5 493 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 OR6Y1Q8NGX8 325 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 CAAP1Q9H8G2 361 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 EIF2B3Q9NR50 452 aaKnown RBP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 SLC8A2Q9UPR5 921 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 AURKAO14965 403 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 GOT2P00505 430 aaKnown RBP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 CD68P34810 354 aaPredicted RBP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 CUZD1Q86UP6 607 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 FNDC5Q8NAU1 212 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 METTL6Q8TCB7 284 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 SPPL2BQ8TCT7 592 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 ZNF184Q99676 751 aaPredicted RBP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 THUMPD3Q9BV44 507 aaKnown RBP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 SLC7A8Q9UHI5 535 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 FCF1Q9Y324 198 aaKnown RBP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 SLCO1B7G3V0H7 640 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 TBX10O75333 385 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 SMNDC1O75940 238 aaKnown RBP eCLIP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 ME2P23368 584 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 CLCN5P51795 746 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 RIPK1Q13546 671 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 ZNF697Q5TEC3 545 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 RNF19BQ6ZMZ0 732 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 OTOP2Q7RTS6 562 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 IQCF2Q8IXL9 164 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 FBXO22Q8NEZ5 403 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 DNAJB14Q8TBM8 379 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 CENPIQ92674 756 aaPredicted RBP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 CORO1BQ9BR76 489 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 CENPKQ9BS16 269 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 HGH1Q9BTY7 390 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 MOCS1Q9NZB8 636 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 EGFL7Q9UHF1 273 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 UBXN8O00124 270 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 NDUFB5O43674 189 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 ZBTB14O43829 449 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 ACADSP16219 412 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 IL10P22301 178 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 MRPS35P82673 323 aaKnown RBP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 PUS10Q3MIT2 529 aaKnown RBP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 TSTD2Q5T7W7 516 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 CYP4V2Q6ZWL3 525 aaPredicted RBP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 PIWIL4Q7Z3Z4 852 aaKnown RBP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 MILR1Q7Z6M3 343 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 ARL14EPQ8N8R7 260 aaPredicted RBP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 PBXIP1Q96AQ6 731 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 SLC7A6OSQ96CW6 309 aaPredicted RBP13.53□□□□□ -0.24
SIRPA-203ENST00000400068 TNKS2Q9H2K2 1166 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 VCX3AQ9NNX9 186 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 BATF3Q9NR55 127 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 CIDEBQ9UHD4 219 aa13.53□□□□□ -0.24
SIRPA-203ENST00000400068 SNAP91O60641 907 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 COQ9O75208 318 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 HIST1H2AGP0C0S8 130 aaPredicted RBP13.52□□□□□ -0.24
SIRPA-203ENST00000400068 HIST1H2ADP20671 130 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 MC4RP32245 332 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 SLC11A1P49279 550 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 GNA12Q03113 381 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 HNRNPDQ14103 355 aaKnown RBP13.52□□□□□ -0.24
SIRPA-203ENST00000400068 IKBKEQ14164 716 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 MBLAC2Q68D91 279 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 AMIGO2Q86SJ2 522 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 SLC22A9Q8IVM8 553 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 HIST1H2AHQ96KK5 128 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 HIST1H2AJQ99878 128 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 H2AFJQ9BTM1 129 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 KLHL4Q9C0H6 718 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 KATNBL1Q9H079 304 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 ASB8Q9H765 288 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 PNPLA8Q9NP80 782 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 GIMAP2Q9UG22 337 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 ZNHIT2Q9UHR6 403 aa13.52□□□□□ -0.24
SIRPA-203ENST00000400068 A0A087X1B8 175 aa13.52□□□□□ -0.25
SIRPA-203ENST00000400068 C1orf232A0A0U1RR37 186 aa13.52□□□□□ -0.25
SIRPA-203ENST00000400068 RGSL1A5PLK6 1076 aa13.52□□□□□ -0.25
SIRPA-203ENST00000400068 OR6C75A6NL08 312 aa13.52□□□□□ -0.25
SIRPA-203ENST00000400068 BHMG1C9JSJ3 638 aaPredicted RBP13.52□□□□□ -0.25
SIRPA-203ENST00000400068 FGF3P11487 239 aaPredicted RBP13.52□□□□□ -0.25
SIRPA-203ENST00000400068 HGFP14210 728 aa13.52□□□□□ -0.25
SIRPA-203ENST00000400068 KPNA1P52294 538 aaPredicted RBP13.52□□□□□ -0.25
SIRPA-203ENST00000400068 MS4A13Q5J8X5 152 aa13.52□□□□□ -0.25
SIRPA-203ENST00000400068 ZNF598Q86UK7 904 aaKnown RBP13.52□□□□□ -0.25
SIRPA-203ENST00000400068 MIPEPQ99797 713 aa13.52□□□□□ -0.25
SIRPA-203ENST00000400068 MRPL9Q9BYD2 267 aaKnown RBP13.52□□□□□ -0.25
SIRPA-203ENST00000400068 TRIM54Q9BYV2 358 aa13.52□□□□□ -0.25
SIRPA-203ENST00000400068 ZDHHC2Q9UIJ5 367 aa13.52□□□□□ -0.25
SIRPA-203ENST00000400068 PCDHB12Q9Y5F1 795 aa13.52□□□□□ -0.25
SIRPA-203ENST00000400068 INPP4BO15327 924 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms