RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 DYRK3O43781 588 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 MSCO60682 206 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 CNOT3O75175 753 aaKnown RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 ASGR1P07306 291 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 PABPC1P11940 636 aaKnown RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 PRKAR2AP13861 404 aaKnown RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 ARL2P36404 184 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 GUCA1AP43080 201 aaPredicted RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 GPR1P46091 355 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 CAPZA2P47755 286 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 IDH2P48735 452 aaKnown RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 RPL14P50914 215 aaKnown RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 SLC5A3P53794 718 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 DEFA1P59665 94 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 DEFA3P59666 94 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 MTA1Q13330 715 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 CRY1Q16526 586 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 GPAT3Q53EU6 434 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 TEX44Q53QW1 395 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 DCAF12L1Q5VU92 463 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 CLEC6AQ6EIG7 209 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 TMPRSS11BQ86T26 416 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 CYP4Z1Q86W10 505 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 RGL4Q8IZJ4 473 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 ANKRD49Q8WVL7 239 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 TFAP2BQ92481 460 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 MIEF2Q96C03 454 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 MFSD3Q96ES6 412 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 PPM1MQ96MI6 270 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 DEPDC7Q96QD5 511 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 OR52E6Q96RD3 313 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 C9orf16Q9BUW7 83 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 UGT2B28Q9BY64 529 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 MRPL9Q9BYD2 267 aaKnown RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 KLHL25Q9H0H3 589 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 RHBGQ9H310 441 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 PDZD7Q9H5P4 517 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 NMUR1Q9HB89 426 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 KRCC1Q9NPI7 259 aaPredicted RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 CHRAC1Q9NRG0 131 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 PDP2Q9P2J9 529 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 SNX6Q9UNH7 406 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 PCDH15Q96QU1 1955 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SHANK3Q9BYB0 1731 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 TRIM43BA6NCK2 446 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 TMEM191CA6NGB0 347 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 PRR5-ARHGAP8B1AHC4 643 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 E9PAM4 449 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 MRASO14807 208 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 TP73O15350 636 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 MFSD11O43934 449 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 PGM3O95394 542 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 KRT75O95678 551 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 CYP1A1P04798 512 aaPredicted RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 SERPINA6P08185 405 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 CFHP08603 1231 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 FAM58BPP0C7Q3 252 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 NMBRP28336 390 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 MAPK1P28482 360 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 CORO1AP31146 461 aaKnown RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 MC4RP32245 332 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 POLD2P49005 469 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 CXCR3P49682 368 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 PSEN1P49768 467 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 ARHGAP8P85298 464 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SF1Q15637 639 aaKnown RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 DEFB115Q30KQ5 88 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 XKR6Q5GH73 641 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 CES5AQ6NT32 575 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 RFWD3Q6PCD5 774 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SERPINA13PQ6UXR4 307 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 HEATR4Q86WZ0 1026 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SYT12Q8IV01 421 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 ADHFE1Q8IWW8 467 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 RASGEF1CQ8N431 466 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 DDHD1Q8NEL9 900 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 ACMSDQ8TDX5 336 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SUSD6Q92537 303 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 RORBQ92753 470 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 C19orf60Q96EN9 201 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 RPL10LQ96L21 214 aaKnown RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 ZNF558Q96NG5 402 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 GBA3Q9H227 469 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 CYLDQ9NQC7 956 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 CLIC5Q9NZA1 410 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 COPG2Q9UBF2 871 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 AJAP1Q9UKB5 411 aaPredicted RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 ADAM28Q9UKQ2 775 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 OGDHLQ9ULD0 1010 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 N6AMT1Q9Y5N5 214 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 MAFBQ9Y5Q3 323 aaPredicted RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 LYVE1Q9Y5Y7 322 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 PNMA8CA0A1B0GUJ8 204 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 FAM220BPB1ANY3 271 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 TK2O00142 265 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 ENPP3O14638 875 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 GMFGO60234 142 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 TSC22D2O75157 780 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 FSBPO95073 299 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms