RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 FZD3Q9NPG1 666 aa17.58■□□□□ 0.4
SMIM11A-202ENST00000399295 DNAAF2Q9NVR5 837 aaKnown RBP17.58■□□□□ 0.4
SMIM11A-202ENST00000399295 SEPT10Q9P0V9 454 aa17.58■□□□□ 0.4
SMIM11A-202ENST00000399295 CA5BQ9Y2D0 317 aa17.58■□□□□ 0.4
SMIM11A-202ENST00000399295 ATP8A1Q9Y2Q0 1164 aa17.58■□□□□ 0.4
SMIM11A-202ENST00000399295 CACNA1AO00555 2505 aa17.58■□□□□ 0.4
SMIM11A-202ENST00000399295 PCDH15Q96QU1 1955 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 DCDC2BA2VCK2 349 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 CCDC151A5D8V7 595 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 TLR4O00206 839 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 HTRA2O43464 458 aaPredicted RBP17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 LIASO43766 372 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 MAGEC1O60732 1142 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 ZNF189O75820 626 aaPredicted RBP17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 PRKCGP05129 697 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 PTGIRP43119 386 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 FAM193AP78312 1265 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 DSC2Q02487 901 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 OVGP1Q12889 678 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 TRAF2Q12933 501 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 ZBTB17Q13105 803 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 FGL2Q14314 439 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 ALG1LQ6GMV1 187 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 TTC27Q6P3X3 843 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 B4GALNT4Q76KP1 1039 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 IQCHQ86VS3 1027 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 JAMLQ86YT9 394 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 TFB1MQ8WVM0 346 aaKnown RBP17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 ASB12Q8WXK4 309 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 SPOCK2Q92563 424 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 HAUS1Q96CS2 278 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 DMGDHQ9UI17 866 aaKnown RBP17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 R3HDM2Q9Y2K5 976 aaKnown RBP17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 PCDHB9Q9Y5E1 797 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 RAI2Q9Y5P3 530 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 CABIN1Q9Y6J0 2220 aa17.57■□□□□ 0.4
SMIM11A-202ENST00000399295 TTI1O43156 1089 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 DFNA5O60443 496 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 TM7SF2O76062 418 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 ITGAVP06756 1048 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 ZNF883P0CG24 379 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 CSRP1P21291 193 aaKnown RBP17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 MMP12P39900 470 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 SLC7A5Q01650 507 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 OTUD4Q01804 1114 aaKnown RBP17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 SEMG2Q02383 582 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 CUL1Q13616 776 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 PRKD1Q15139 912 aaPredicted RBP17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 NOMO1Q15155 1222 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 MAP9Q49MG5 647 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 ARMC12Q5T9G4 340 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 ZC3H18Q86VM9 953 aaKnown RBP17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 CNTD1Q8N815 330 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 SLC35B2Q8TB61 432 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 ARRDC2Q8TBH0 407 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 ACTL9Q8TC94 416 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 CCHCR1Q8TD31 782 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 ATG4AQ8WYN0 398 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 KLHDC7BQ96G42 594 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 LENG8Q96PV6 779 aaPredicted RBP17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 ERP44Q9BS26 406 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 CEP41Q9BYV8 373 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 IL21RQ9HBE5 538 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 GDF3Q9NR23 364 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 FAM114A2Q9NRY5 505 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 PHTF1Q9UMS5 762 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 HS3ST3A1Q9Y663 406 aa17.56■□□□□ 0.4
SMIM11A-202ENST00000399295 SHROOM3Q8TF72 1996 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 PLXNA2O75051 1894 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 BHMG1C9JSJ3 638 aaPredicted RBP17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 H0Y8X5 98 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 RAD51BO15315 384 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 PGLSO95336 258 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 CPP00450 1065 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 H2AFXP16104 143 aaPredicted RBP17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 LIG3P49916 1009 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 DRG2P55039 364 aaKnown RBP17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 CLDN2P57739 230 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 NXPH1P58417 271 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 GUCY2DQ02846 1103 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 NIPAL4Q0D2K0 466 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 SNX1Q13596 522 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 PPP1R7Q15435 360 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 FAM174AQ8TBP5 190 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 HNRNPLLQ8WVV9 542 aaKnown RBP17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 SEC14L1Q92503 715 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 AGAP3Q96P47 875 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 C1QTNF7Q9BXJ2 289 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 EPB41L5Q9HCM4 733 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 ZNF148Q9UQR1 794 aa17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 FNDC3AQ9Y2H6 1198 aaKnown RBP17.55■□□□□ 0.4
SMIM11A-202ENST00000399295 DNAH14Q0VDD8 3507 aa17.54■□□□□ 0.4
SMIM11A-202ENST00000399295 CFAP69A5D8W1 941 aa17.54■□□□□ 0.4
SMIM11A-202ENST00000399295 FPGTO14772 594 aa17.54■□□□□ 0.4
SMIM11A-202ENST00000399295 MTSS1O43312 755 aa17.54■□□□□ 0.4
SMIM11A-202ENST00000399295 THEGLP0DJG4 465 aa17.54■□□□□ 0.4
SMIM11A-202ENST00000399295 NFKBIAP25963 317 aa17.54■□□□□ 0.4
SMIM11A-202ENST00000399295 EIF3EP60228 445 aaKnown RBP17.54■□□□□ 0.4
SMIM11A-202ENST00000399295 VSNL1P62760 191 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms