RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 WNT10BO00744 389 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 CCNCP24863 283 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 CLK2P49760 499 aaKnown RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 CDH8P55286 799 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 JAM2P57087 298 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 CACNG1Q06432 222 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 CDK18Q07002 472 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 CES3Q6UWW8 571 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 C16orf59Q7L2K0 433 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 CHPFQ8IZ52 775 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 BEND7Q8N7W2 519 aaPredicted RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 SLC4A11Q8NBS3 891 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 NACC2Q96BF6 587 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 PPP1R14BQ96C90 147 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 NUSAP1Q9BXS6 441 aaKnown RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 AGO1Q9UL18 857 aaKnown RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 MDM4O15151 490 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 FARP2O94887 1054 aaPredicted RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 DNAJB1P25685 340 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 CDH5P33151 784 aaPredicted RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 GPR1P46091 355 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 RPL38P63173 70 aaKnown RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 SLC25A3Q00325 362 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 GPAT3Q53EU6 434 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 RAP1GAP2Q684P5 730 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 DRICH1Q6PGQ1 229 aaPredicted RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 BEND5Q7L4P6 421 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 KCNK18Q7Z418 384 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 TRAPPC5Q8IUR0 188 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 C10orf107Q8IVU9 208 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 PCDH20Q8N6Y1 951 aaKnown RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 LRRN4CLQ8ND94 238 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 KCTD4Q8WVF5 259 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 PIK3R5Q8WYR1 880 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 KAT5Q92993 513 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 DCUN1D5Q9BTE7 237 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 TTLL2Q9BWV7 592 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 HMX1Q9NP08 348 aaPredicted RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 MCM8Q9UJA3 840 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 SLC12A4Q9UP95 1085 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 SLIT2O94813 1529 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 KCNK1O00180 336 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 PER2O15055 1255 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 ACSL4O60488 711 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 NPHS1O60500 1241 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 ADH1CP00326 375 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 SDC2P34741 201 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 C15orf59Q2T9L4 293 aaPredicted RBP8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 ADGRD1Q6QNK2 874 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 LCLAT1Q6UWP7 414 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 TMPRSS11AQ6ZMR5 421 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 PGAM4Q8N0Y7 254 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 TMEM199Q8N511 208 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 OR2T34Q8NGX1 318 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 OR2T3Q8NH03 318 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 RIT1Q92963 219 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 FAM136AQ96C01 138 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 HAVCR1Q96D42 359 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 TMPRSS4Q9NRS4 437 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 EXD2Q9NVH0 621 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 TCRBV9S1A1TA0A576 114 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 PTGES3LE9PB15 166 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 HAT1O14929 419 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 DHX15O43143 795 aaKnown RBP8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 CLDN11O75508 207 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 ENDOD1O94919 500 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 BMP7P18075 431 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 DLG1Q12959 904 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 UBAP2LQ14157 1087 aaKnown RBP8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 ACAP2Q15057 778 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 SPATS1Q496A3 300 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 C9orf57Q5W0N0 161 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 C16orf46Q6P387 395 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 TTC7BQ86TV6 843 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 CUZD1Q86UP6 607 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 RASAL3Q86YV0 1011 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 ZC3H7AQ8IWR0 971 aaKnown RBP8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 COLGALT2Q8IYK4 626 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 OR8D1Q8WZ84 308 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 CLP1Q92989 425 aaKnown RBP8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 BHMTQ93088 406 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 PPCDCQ96CD2 204 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 ZBTB45Q96K62 511 aaPredicted RBP8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 DGCR6LQ9BY27 220 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 EPB41L1Q9H4G0 881 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 PTGFRNQ9P2B2 879 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 FAM198AQ9UFP1 575 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 SLC27A6Q9Y2P4 619 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 TIMM13Q9Y5L4 95 aaPredicted RBP8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 AP4B1Q9Y6B7 739 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 MRC1P22897 1456 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 SHOX2O60902 331 aaPredicted RBP8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 SLC25A12O75746 678 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 CALCAP01258 141 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 GPIP06744 558 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 NR2F1P10589 423 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 KELP23276 732 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 VBP1P61758 197 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 FCHO2Q0JRZ9 810 aa8.37□□□□□ -1.07
SPTLC3-201ENST00000399002 GALNT3Q14435 633 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms