RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 KIAA1524Q8TCG1 905 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 ALG3Q92685 438 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 SMIM14Q96QK8 99 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 FRYQ5TBA9 3013 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 A0A0J9YYE9 177 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 TRIM38O00635 465 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 PPP1R12AO14974 1030 aaPredicted RBP16.74■□□□□ 0.27
APTR-201ENST00000398043 HYAL3O43820 417 aaPredicted RBP16.74■□□□□ 0.27
APTR-201ENST00000398043 LZTS3O60299 673 aaPredicted RBP16.74■□□□□ 0.27
APTR-201ENST00000398043 TRIM16O95361 564 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 TRBC1P01850 177 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 PTPN7P35236 360 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 TRIM23P36406 574 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 COPS2P61201 443 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 AP1B1Q10567 949 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 MTM1Q13496 603 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 INPP5AQ14642 412 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 PROX2Q3B8N5 592 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 ODF2Q5BJF6 829 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 KAZNQ674X7 775 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 MACC1Q6ZN28 852 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 KIAA1328Q86T90 577 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 TSPAN33Q86UF1 283 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 PNPLA1Q8N8W4 532 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 OR4C6Q8NH72 309 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 IMP4Q96G21 291 aaKnown RBP16.74■□□□□ 0.27
APTR-201ENST00000398043 RBM41Q96IZ5 413 aaKnown RBP16.74■□□□□ 0.27
APTR-201ENST00000398043 APOOQ9BUR5 198 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 SCNM1Q9BWG6 230 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 TMEM121BQ9BXQ6 578 aaPredicted RBP16.74■□□□□ 0.27
APTR-201ENST00000398043 DNAJC28Q9NX36 388 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 FTSJ1Q9UET6 329 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 CHKBQ9Y259 395 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 EFR3BQ9Y2G0 817 aa16.74■□□□□ 0.27
APTR-201ENST00000398043 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.74■□□□□ 0.27
APTR-201ENST00000398043 A0A0U1RQS6 177 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 CCDC66A2RUB6 948 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 PSMD11O00231 422 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 LDOC1O95751 146 aaPredicted RBP16.73■□□□□ 0.27
APTR-201ENST00000398043 ALPIP09923 528 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 CTPS1P17812 591 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 SPINK2P20155 84 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 PTPN3P26045 913 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 HNF1BP35680 557 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 GSDMDP57764 484 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 RPL26P61254 145 aaKnown RBP16.73■□□□□ 0.27
APTR-201ENST00000398043 HNRNPKP61978 463 aaKnown RBP eCLIP16.73■□□□□ 0.27
APTR-201ENST00000398043 WASHC5Q12768 1159 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 ZNF211Q13398 564 aaPredicted RBP16.73■□□□□ 0.27
APTR-201ENST00000398043 PTK2BQ14289 1009 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 CDKN3Q16667 212 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 TEX44Q53QW1 395 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 ESRP1Q6NXG1 681 aaKnown RBP16.73■□□□□ 0.27
APTR-201ENST00000398043 CRTC1Q6UUV9 634 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 NYAP1Q6ZVC0 841 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 BZW1Q7L1Q6 419 aaKnown RBP16.73■□□□□ 0.27
APTR-201ENST00000398043 HSD11B1LQ7Z5J1 315 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 TECPR1Q7Z6L1 1165 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 CHCHD4Q8N4Q1 142 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.73■□□□□ 0.27
APTR-201ENST00000398043 ZNF548Q8NEK5 533 aaPredicted RBP16.73■□□□□ 0.27
APTR-201ENST00000398043 FUBP1Q96AE4 644 aaKnown RBP16.73■□□□□ 0.27
APTR-201ENST00000398043 CNDP2Q96KP4 475 aaKnown RBP16.73■□□□□ 0.27
APTR-201ENST00000398043 TBATAQ96M53 351 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 TRIB3Q96RU7 358 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 CEP41Q9BYV8 373 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 TCEAL2Q9H3H9 227 aaPredicted RBP16.73■□□□□ 0.27
APTR-201ENST00000398043 HAUS2Q9NVX0 235 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 RPL26L1Q9UNX3 145 aaKnown RBP16.73■□□□□ 0.27
APTR-201ENST00000398043 APOBEC2Q9Y235 224 aaKnown RBP16.73■□□□□ 0.27
APTR-201ENST00000398043 ADGRG1Q9Y653 693 aa16.73■□□□□ 0.27
APTR-201ENST00000398043 LY6G6EA0A0G2JKS1 128 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 K7ESM1 405 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 ENC1O14682 589 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 SCAMP1O15126 338 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 SIGLEC6O43699 453 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 HOXC4P09017 264 aaPredicted RBP16.72■□□□□ 0.27
APTR-201ENST00000398043 CYP2A6P11509 494 aaPredicted RBP16.72■□□□□ 0.27
APTR-201ENST00000398043 JUNDP17535 347 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 CD68P34810 354 aaPredicted RBP16.72■□□□□ 0.27
APTR-201ENST00000398043 CD86P42081 329 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 ACADVLP49748 655 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 THOP1P52888 689 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 PTSQ03393 145 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 KIF5AQ12840 1032 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 NFATC4Q14934 902 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 SLC14A2Q15849 920 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 KCTD16Q68DU8 428 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 USP45Q70EL2 814 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 RBFAQ8N0V3 343 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 PAF1Q8N7H5 531 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 TFB1MQ8WVM0 346 aaKnown RBP16.72■□□□□ 0.27
APTR-201ENST00000398043 P3H4Q92791 437 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 DTD2Q96FN9 168 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 TEKT5Q96M29 485 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 LYSMD1Q96S90 227 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 HEMGNQ9BXL5 484 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 PCDH9Q9HC56 1237 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 KLK13Q9UKR3 277 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 TTLL3Q9Y4R7 772 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms