RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 PSMC3IPQ9P2W1 217 aaPredicted RBP6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 PCDHA3Q9Y5H8 950 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 OPLAHO14841 1288 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 UBOX5O94941 541 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 NDUFB10O96000 172 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 BRAFP15056 766 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 MAP4P27816 1152 aaKnown RBP6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 HNRNPKP61978 463 aaKnown RBP eCLIP6.62□□□□□ -1.354e-7■■■■□ 25
TM9SF4-202ENST00000398022 YWHAEP62258 255 aaKnown RBP6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 IL9RQ01113 521 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 TCP10Q12799 353 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 PMS2P3Q13401 168 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 TMEM132BQ14DG7 1078 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 TAF5Q15542 800 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 CHRNA6Q15825 494 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 SPRED3Q2MJR0 410 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 ATAT1Q5SQI0 421 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 MAP1SQ66K74 1059 aaPredicted RBP6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 KLHL24Q6TFL4 600 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 OTOP1Q7RTM1 612 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 ZC3H18Q86VM9 953 aaKnown RBP6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 SYNPOQ8N3V7 929 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 ATP6V0D2Q8N8Y2 350 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 GSTCDQ8NEC7 633 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 AGAP11Q8TF27 550 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 SLC20A1Q8WUM9 679 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 TMEM40Q8WWA1 233 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 CAPSLQ8WWF8 208 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 CPT1BQ92523 772 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 FCRL4Q96PJ5 515 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 FAM193BQ96PV7 902 aaPredicted RBP6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 ZNF577Q9BSK1 485 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 SPXQ9BT56 116 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 POLR1EQ9GZS1 481 aaKnown RBP6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 RNF38Q9H0F5 515 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 TMEM168Q9H0V1 697 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 SLC6A17Q9H1V8 727 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 EPB41L4BQ9H329 900 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 CDC42EP4Q9H3Q1 356 aaKnown RBP6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 SYTL2Q9HCH5 934 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 SLC35D1Q9NTN3 355 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 ETNK2Q9NVF9 386 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 ZNHIT2Q9UHR6 403 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 HACL1Q9UJ83 578 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 AKT3Q9Y243 479 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 ZMYM2Q9UBW7 1377 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 ALOX15BO15296 676 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 CLOCKO15516 846 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 CDH16O75309 829 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 GCLMP48507 274 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 NR1H3Q13133 447 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 RNF219Q5W0B1 726 aaPredicted RBP6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 TPGS1Q6ZTW0 290 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 C12orf50Q8NA57 414 aaPredicted RBP6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 PPP1R16BQ96T49 567 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 SPATA16Q9BXB7 569 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 CPNE7Q9UBL6 633 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 ABT1Q9ULW3 272 aaKnown RBP6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 VWA7Q9Y334 891 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 TRAV20A0A0B4J274 112 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 TLL1O43897 1013 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 ALX3O95076 343 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 STAG3L3P0CL85 134 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 MAPTP10636 758 aaKnown RBP6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 C6P13671 934 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 ITGALP20701 1170 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 TYK2P29597 1187 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 MAPK4P31152 587 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 GSTM5P46439 218 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 SNAP25P60880 206 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 NRG1Q02297 640 aaPredicted RBP6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 CHAF1BQ13112 559 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 ZNF268Q14587 947 aaPredicted RBP6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 FASTKD3Q14CZ7 662 aaKnown RBP6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 LRRC14Q15048 493 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 SWI5Q1ZZU3 235 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 DNAL1Q4LDG9 190 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 RABEPKQ7Z6M1 372 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 CYP4X1Q8N118 509 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 KCTD6Q8NC69 237 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 SLC5A5Q92911 643 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 PTERQ96BW5 349 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 NMD3Q96D46 503 aaKnown RBP6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 TGS1Q96RS0 853 aaKnown RBP6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 LXNQ9BS40 222 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 CNPY3Q9BT09 278 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 OSBPL6Q9BZF3 934 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 ADAM7Q9H2U9 754 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 RXFP3Q9NSD7 469 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 DLGAP2Q9P1A6 1054 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 LRFN2Q9ULH4 789 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 PADI4Q9UM07 663 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 GPSM3Q9Y4H4 160 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 ATP2A1O14983 1001 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 PSMD10O75832 226 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 TTC4O95801 387 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 RARAP10276 462 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 SLC5A2P31639 672 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 GPC1P35052 558 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms