RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ZNF778Q96MU6 729 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 CEP41Q9BYV8 373 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 TJP2Q9UDY2 1190 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 Q9Y3F1 56 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 A0A087WZ62 844 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 CENPXA8MT69 81 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 PRKCGP05129 697 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 ZNF26P17031 533 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 CDH8P55286 799 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 VAC14Q08AM6 782 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 CEACAM7Q14002 265 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 PIGGQ5H8A4 983 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 PPP4R4Q6NUP7 873 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 METTL2BQ6P1Q9 378 aaKnown RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 RANBP10Q6VN20 620 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 CATSPER4Q7RTX7 472 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 ANKRD23Q86SG2 305 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 DEFB106AQ8N104 65 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 AADATQ8N5Z0 425 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 DCPSQ96C86 337 aaKnown RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 BCL7BQ9BQE9 202 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 FDXACB1Q9BRP7 624 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 ANKRD60Q9BZ19 345 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 GBA3Q9H227 469 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 MARCH7Q9H992 704 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 FANCEQ9HB96 536 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 SLC8A2Q9UPR5 921 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 NCF1BA6NI72 391 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 NCF1CA8MVU1 366 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 E5RI56 91 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 MOCS2O96007 188 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 NCF1P14598 390 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 FCHO2Q0JRZ9 810 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 IQSEC1Q6DN90 963 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 PRR23CQ6ZRP0 262 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 PAGE2Q7Z2X7 111 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 BBS5Q8N3I7 341 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 RANBP9Q96S59 729 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 WDR6Q9NNW5 1121 aaKnown RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 CCDC167Q9P0B6 97 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 NOD1Q9Y239 953 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 NRCAMQ92823 1304 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 BTN3A3O00478 584 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 ZNF682O95780 498 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 NPPAP01160 153 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 UMPSP11172 480 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 CD151P48509 253 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 DLG1Q12959 904 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 CCNIQ14094 377 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 CSHL1Q14406 222 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 SOWAHAQ2M3V2 549 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 PKN3Q6P5Z2 889 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 LRRC8DQ7L1W4 858 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 ZNF567Q8N184 647 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 IPMKQ8NFU5 416 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 CIB1Q99828 191 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 NDUFAF1Q9Y375 327 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 TMED5Q9Y3A6 229 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 NUMBLQ9Y6R0 609 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 SMIM28A0A1B0GU29 152 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 H0YC42 278 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 MAGEB3O15480 346 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 B4GALT5O43286 388 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 ZNF623O75123 536 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 ATP6V1E1P36543 226 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 DAOAP59103 153 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 TPI1P60174 286 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 SQLEQ14534 574 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 ATP6AP1LQ52LC2 224 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 PAGE2BQ5JRK9 111 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 TIGD7Q6NT04 549 aaPredicted RBP5.46□□□□□ -1.53
PTPRD-205ENST00000397611 FRMD7Q6ZUT3 714 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 SZRD1Q7Z422 152 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 TRIM69Q86WT6 500 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 S100ZQ8WXG8 99 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 OTULINQ96BN8 352 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 DMRTB1Q96MA1 342 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 CEP295NLQ96MC4 621 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 WDR12Q9GZL7 423 aaKnown RBP5.46□□□□□ -1.53
PTPRD-205ENST00000397611 ZBTB26Q9HCK0 441 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 CSNK1G1Q9HCP0 422 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 CHST12Q9NRB3 414 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 FZD10Q9ULW2 581 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 BTBD3Q9Y2F9 522 aa5.46□□□□□ -1.53
PTPRD-205ENST00000397611 TRIM64BA6NI03 449 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 FAM25AB3EWG3 89 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 FAM25CB3EWG5 89 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 FAM25GB3EWG6 89 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 RNASEH1O60930 286 aaKnown RBP5.46□□□□□ -1.54
PTPRD-205ENST00000397611 USP12O75317 370 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 GABBR2O75899 941 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 PIGNO95427 931 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 F2P00734 622 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 TFPTP0C1Z6 253 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 PTPN3P26045 913 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 YBEYP58557 167 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-205ENST00000397611 PHC1P78364 1004 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 RALGDSQ12967 914 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 TUBA3CQ13748 450 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 PCSK7Q16549 785 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms