RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 GALNT18Q6P9A2 607 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 C4orf22Q6V702 233 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 RFPL4BQ6ZWI9 263 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 USP43Q70EL4 1123 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 LYSMD3Q7Z3D4 306 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 IGFN1Q86VF2 1251 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 GRAMD2AQ8IUY3 354 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 SLC41A1Q8IVJ1 513 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 CPSF7Q8N684 471 aaKnown RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 PDPRQ8NCN5 879 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 TNIP2Q8NFZ5 429 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 ZSCAN18Q8TBC5 510 aaPredicted RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 URGCPQ8TCY9 931 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 GPR152Q8TDT2 470 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 EXT2Q93063 718 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 WNT8BQ93098 351 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 ALPK1Q96QP1 1244 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 TMEM209Q96SK2 561 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 DOK1Q99704 481 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 PKP2Q99959 881 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 RNF38Q9H0F5 515 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 PLEKHA5Q9HAU0 1116 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 NMRAL1Q9HBL8 299 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 CRTAC1Q9NQ79 661 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 MIOSQ9NXC5 875 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 MPP6Q9NZW5 540 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 TMEM9Q9P0T7 183 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 SLC2A6Q9UGQ3 507 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 STAP1Q9ULZ2 295 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 PRPF19Q9UMS4 504 aaKnown RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 RUVBL2Q9Y230 463 aaKnown RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 OTOFQ9HC10 1997 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 ATP6AP2A0A1C7CYW4 349 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 M0QX08 132 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 PTGESO14684 152 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 MTRF1O75570 445 aaKnown RBP5.04□□□□□ -1.6
SSR1-202ENST00000397511 ATP6AP2O75787 350 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 B3GAT3O94766 335 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 LRIG2O94898 1065 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 PIGNO95427 931 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 BCL10O95999 233 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 OR4Q2P0C623 313 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 MYL4P12829 197 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 TSHRP16473 764 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 NELFEP18615 380 aaKnown RBP5.04□□□□□ -1.6
SSR1-202ENST00000397511 MX2P20592 715 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 MAP4P27816 1152 aaKnown RBP5.04□□□□□ -1.6
SSR1-202ENST00000397511 BRCC3P46736 316 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 GRIA4P48058 902 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 SCNN1GP51170 649 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 NME5P56597 212 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 NRF1Q16656 503 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 FSCBQ5H9T9 825 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 TMTC4Q5T4D3 741 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 LAYNQ6UX15 382 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 CCDC81Q6ZN84 652 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 STRADAQ7RTN6 431 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 TLK2Q86UE8 772 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 UNC93AQ86WB7 457 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 SNX32Q86XE0 403 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 ZDHHC17Q8IUH5 632 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 PSTKQ8IV42 348 aaKnown RBP5.04□□□□□ -1.6
SSR1-202ENST00000397511 FIBCD1Q8N539 461 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 LRRC52Q8N7C0 313 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 SMG8Q8ND04 991 aaKnown RBP5.04□□□□□ -1.6
SSR1-202ENST00000397511 SVIPQ8NHG7 77 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 ADAMTS16Q8TE57 1224 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 ZNF419Q96HQ0 510 aaPredicted RBP5.04□□□□□ -1.6
SSR1-202ENST00000397511 VPS39Q96JC1 886 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 FAR2Q96K12 515 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 SENP8Q96LD8 212 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 ZNF597Q96LX8 424 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 RBBP8Q99708 897 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 SMOQ99835 787 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 MLPHQ9BV36 600 aaPredicted RBP5.04□□□□□ -1.6
SSR1-202ENST00000397511 COLEC11Q9BWP8 271 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 GATA5Q9BWX5 397 aaPredicted RBP5.04□□□□□ -1.6
SSR1-202ENST00000397511 RSPH9Q9H1X1 276 aaPredicted RBP5.04□□□□□ -1.6
SSR1-202ENST00000397511 OLAHQ9NV23 265 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 FLRT1Q9NZU1 646 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 ZDHHC2Q9UIJ5 367 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 TLK1Q9UKI8 766 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 KCNH4Q9UQ05 1017 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 FNDC3AQ9Y2H6 1198 aaKnown RBP5.04□□□□□ -1.6
SSR1-202ENST00000397511 ANGPTL3Q9Y5C1 460 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 PCDHGA3Q9Y5H0 932 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 CORINQ9Y5Q5 1042 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 ZCWPW2A0A1B0GU75 182 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 ILVBLA1L0T0 632 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 TBKBP1A7MCY6 615 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 SYCE1LA8MT33 242 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 C9IYK1 514 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 C9JVG2 144 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 TMX2-CTNND1H3BSU7 103 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 KRT6AP02538 564 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 SLC4A1P02730 911 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 KRT6BP04259 564 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 CAPNS1P04632 268 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 CCNA2P20248 432 aa5.04□□□□□ -1.6
SSR1-202ENST00000397511 CD247P20963 164 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms