RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 GALNT3Q14435 633 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 QPCTQ16769 361 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 ANKRD20A2Q5SQ80 823 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 ANKRD20A1Q5TYW2 823 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 ANKRD20A3Q5VUR7 823 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 DENND2CQ68D51 928 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 KYAT3Q6YP21 454 aaKnown RBP21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 ABI3BPQ7Z7G0 1075 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 TSPAN33Q86UF1 283 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 FAM71DQ8N9W8 422 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 TP53I13Q8NBR0 393 aaPredicted RBP21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 CCDC110Q8TBZ0 833 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 RMDN1Q96DB5 314 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 IFT43Q96FT9 208 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 KLHDC7BQ96G42 594 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 OXNAD1Q96HP4 312 aaPredicted RBP21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 SPATA13Q96N96 652 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 TRIB3Q96RU7 358 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 TMEM121Q9BTD3 319 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 ADGRE3Q9BY15 652 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 GAREM1Q9H706 876 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 A0A0U1RQS6 177 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 LIASO43766 372 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 MAGEC1O60732 1142 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 RECQL5O94762 991 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 THEGLP0DJG4 465 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 CDK18Q07002 472 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 ARHGEF7Q14155 803 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 ACOX1Q15067 660 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 IRF4Q15306 451 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 RSPO4Q2I0M5 234 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 HLA-BQ31612 363 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 UAP1L1Q3KQV9 507 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 KDELC1Q6UW63 502 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 KDM7AQ6ZMT4 941 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 OR13H1Q8NG92 308 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 C1orf54Q8WWF1 131 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 CENPTQ96BT3 561 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 BMFQ96LC9 184 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 FRMD8P1Q9BZ68 369 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 IL21RQ9HBE5 538 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 GDF3Q9NR23 364 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 MBNL1Q9NR56 388 aaKnown RBP21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 FNDC3AQ9Y2H6 1198 aaKnown RBP21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 HS3ST3A1Q9Y663 406 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 TMEM131Q92545 1883 aa21.24■□□□□ 0.99
TSPAN4-206ENST00000397408 GOLGA8CPA6NN73 597 aa21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 OPHN1O60890 802 aa21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 GM2AP17900 193 aa21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 PSMB4P28070 264 aa21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 GDF10P55107 478 aa21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 WNT3AP56704 352 aa21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 LRRC14Q15048 493 aa21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 AGERQ15109 404 aa21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 SIX1Q15475 284 aaPredicted RBP21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 WSCD2Q2TBF2 565 aa21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 LRRC66Q68CR7 880 aa21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 CRTC1Q6UUV9 634 aa21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 Q6ZSR6 202 aa21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 SPATS2Q86XZ4 545 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 MLPHQ9BV36 600 aaPredicted RBP21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 ASCC3Q8N3C0 2202 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 SPTBN4Q9H254 2564 aa21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 CABIN1Q9Y6J0 2220 aa21.23■□□□□ 0.99
TSPAN4-206ENST00000397408 C5orf60A6NFR6 353 aa21.22■□□□□ 0.99
TSPAN4-206ENST00000397408 ANKRD66B4E2M5 251 aa21.22■□□□□ 0.99
TSPAN4-206ENST00000397408 NDST3O95803 873 aa21.22■□□□□ 0.99
TSPAN4-206ENST00000397408 PCCBP05166 539 aa21.22■□□□□ 0.99
TSPAN4-206ENST00000397408 SNX1Q13596 522 aa21.22■□□□□ 0.99
TSPAN4-206ENST00000397408 OASLQ15646 514 aaKnown RBP21.22■□□□□ 0.99
TSPAN4-206ENST00000397408 LONRF2Q1L5Z9 754 aa21.22■□□□□ 0.99
TSPAN4-206ENST00000397408 HSD11B1LQ7Z5J1 315 aa21.22■□□□□ 0.99
TSPAN4-206ENST00000397408 IPMKQ8NFU5 416 aa21.22■□□□□ 0.99
TSPAN4-206ENST00000397408 FAM174AQ8TBP5 190 aa21.22■□□□□ 0.99
TSPAN4-206ENST00000397408 MAIP1Q8WWC4 291 aa21.22■□□□□ 0.99
TSPAN4-206ENST00000397408 COQ10AQ96MF6 247 aa21.22■□□□□ 0.99
TSPAN4-206ENST00000397408 GORASP1Q9BQQ3 440 aa21.22■□□□□ 0.99
TSPAN4-206ENST00000397408 DNAAF2Q9NVR5 837 aaKnown RBP21.22■□□□□ 0.99
TSPAN4-206ENST00000397408 PSMD11O00231 422 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 SLC30A4O14863 429 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 ANXA9O76027 345 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 TNNT3P45378 269 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 RABIFP47224 123 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 MPP3Q13368 585 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 ZNF423Q2M1K9 1284 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 PRAMEF14Q5SWL7 426 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 ARHGEF18Q6ZSZ5 1173 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 SLC22A18ASQ8N1D0 253 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 NUS1Q96E22 293 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 PBKQ96KB5 322 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 MRGPRX2Q96LB1 330 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 LYSMD1Q96S90 227 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 ZNF148Q9UQR1 794 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 C1orf232A0A0U1RR37 186 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 ZNF30P17039 623 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 ETV3P41162 512 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 GEMP55040 296 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 PFN3P60673 137 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 GNG11P61952 73 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 PRPSAP1Q14558 356 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms