RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 TEDDM1Q5T9Z0 273 aa19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 ESRP1Q6NXG1 681 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 TRMT10BQ6PF06 316 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 AFTPHQ6ULP2 937 aa19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 CBARPQ8N350 705 aaPredicted RBP19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 OR13J1Q8NGT2 312 aa19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 FAM76AQ8TAV0 307 aa19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 DTX3LQ8TDB6 740 aa19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 ARL8AQ96BM9 186 aa19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 CHFRQ96EP1 664 aa19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 TCF12Q99081 682 aa19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 ZFYVE1Q9HBF4 777 aa19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 BCCIPQ9P287 314 aaKnown RBP eCLIP19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 APPL1Q9UKG1 709 aa19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 ZNF711Q9Y462 761 aa19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 PIAS3Q9Y6X2 628 aa19.08■□□□□ 0.64
TSPAN4-204ENST00000397404 SPTBN5Q9NRC6 3674 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 RGSL1A5PLK6 1076 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 LEFTY1O75610 366 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 VAPBO95292 243 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 UGT2B4P06133 528 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 OGNP20774 298 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 SLC18A1P54219 525 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 MRPS21P82921 87 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 HSP90AA5PQ58FG0 334 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 TMEM196Q5HYL7 178 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 C9orf64Q5T6V5 341 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 RNF187Q5TA31 235 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 NEPROQ6NW34 567 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 TIFABQ6ZNK6 161 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 CCDC91Q7Z6B0 441 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 SDCCAG8Q86SQ7 713 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 OR6K2Q8NGY2 324 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 ACMSDQ8TDX5 336 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 SORCS1Q8WY21 1168 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 RAB7BQ96AH8 199 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 GPR63Q9BZJ6 419 aa19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 NOVA2Q9UNW9 492 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-204ENST00000397404 SMIM23A6NLE4 172 aa19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 LOC730098B7Z3J9 87 aa19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 H3BQF6 201 aa19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 XPAP23025 273 aaPredicted RBP19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 ITGB7P26010 798 aa19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 ELP6Q0PNE2 266 aa19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 SFSWAPQ12872 951 aaKnown RBP19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 TMED2Q15363 201 aa19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 ERAP2Q6P179 960 aa19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 ZNF513Q8N8E2 541 aaPredicted RBP19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.06■□□□□ 0.643e-8■■■■□ 21.6
TSPAN4-204ENST00000397404 CABS1Q96KC9 395 aa19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 KLHL32Q96NJ5 620 aa19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 TTC1Q99614 292 aa19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 DYRK4Q9NR20 520 aa19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 KCTD5Q9NXV2 234 aa19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 PPM1HQ9ULR3 514 aa19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 SMG5Q9UPR3 1016 aaKnown RBP19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 TICRRQ7Z2Z1 1910 aa19.06■□□□□ 0.64
TSPAN4-204ENST00000397404 COL4A2P08572 1712 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 UPK3BL1B0FP48 263 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 UPK3BL2E5RIL1 263 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 H0Y858 1186 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 PSMD11O00231 422 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 BNIP3LO60238 219 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 ERVK-10P10266 1014 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 NR1D1P20393 614 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 MAGOHP61326 146 aaKnown RBP19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 STARD3Q14849 445 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 ARSIQ5FYB1 569 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 CES3Q6UWW8 571 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 PACS1Q6VY07 963 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 Q7L0L9 218 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 TRABD2AQ86V40 505 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 TTC30BQ8N4P2 665 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 CHST14Q8NCH0 376 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 C2CD4AQ8NCU7 369 aaPredicted RBP19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 MDGA1Q8NFP4 955 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 OR4L1Q8NH43 312 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 VOPP1Q96AW1 172 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 CDKN2AIPNLQ96HQ2 116 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 ZNF778Q96MU6 729 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 SMC6Q96SB8 1091 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 RBBP8Q99708 897 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 INTS10Q9NVR2 710 aaKnown RBP19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 IL17CQ9P0M4 197 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 ARL5AQ9Y689 179 aa19.05■□□□□ 0.64
TSPAN4-204ENST00000397404 CXorf49A8MYA2 514 aaPredicted RBP19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 SYNCRIPO60506 623 aaKnown RBP19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 ADH1BP00325 375 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 EPHX1P07099 455 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 C7P10643 843 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 ARNTP27540 789 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 NTSR1P30989 418 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 SLC8A1P32418 973 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 IL12RB1P42701 662 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 KIR2DL1P43626 348 aaPredicted RBP19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 LIMK2P53671 638 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 CAMK2GQ13555 558 aaPredicted RBP19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 LYPLAL1Q5VWZ2 237 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 CERS6Q6ZMG9 384 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 STRA8Q7Z7C7 330 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms