RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 SLC39A1Q9NY26 324 aa15.02■□□□□ -0
SEC13-206ENST00000397102 MOSPD1Q9UJG1 213 aa15.02■□□□□ -0
SEC13-206ENST00000397102 USP9XQ93008 2570 aaPredicted RBP15.01□□□□□ -0.01
SEC13-206ENST00000397102 MYO9AB2RTY4 2548 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 SPTBN1Q01082 2364 aaKnown RBP15.01□□□□□ -0.01
SEC13-206ENST00000397102 FAM170AA1A519 330 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 B4E171 279 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 NKX2-8O15522 239 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 DUX1O43812 170 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 RECQL5O94762 991 aaPredicted RBP15.01□□□□□ -0.01
SEC13-206ENST00000397102 FGF1P05230 155 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 THRAP10827 490 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 CYP11B1P15538 503 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 SDC4P31431 198 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 TSPAN7P41732 249 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 YBEYP58557 167 aaPredicted RBP15.01□□□□□ -0.01
SEC13-206ENST00000397102 RAB15P59190 212 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 CYTH1Q15438 398 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 C15orf59Q2T9L4 293 aaPredicted RBP15.01□□□□□ -0.01
SEC13-206ENST00000397102 LACTB2Q53H82 288 aaPredicted RBP15.01□□□□□ -0.01
SEC13-206ENST00000397102 DCAF12Q5T6F0 453 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 STRADAQ7RTN6 431 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 ATCAYQ86WG3 371 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 ZSWIM9Q86XI8 627 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 CREBRFQ8IUR6 639 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 RTL3Q8N8U3 475 aaKnown RBP15.01□□□□□ -0.01
SEC13-206ENST00000397102 KIAA1143Q96AT1 154 aaPredicted RBP15.01□□□□□ -0.01
SEC13-206ENST00000397102 TUBGCP5Q96RT8 1024 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 DPYSL5Q9BPU6 564 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 EFHD1Q9BUP0 239 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 LGR4Q9BXB1 951 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 GSDMCQ9BYG8 508 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 MAGEB5Q9BZ81 275 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 WDR26Q9H7D7 661 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 GPN2Q9H9Y4 310 aaPredicted RBP15.01□□□□□ -0.01
SEC13-206ENST00000397102 ICE1Q9Y2F5 2266 aa15.01□□□□□ -0.01
SEC13-206ENST00000397102 PDE2AO00408 941 aaPredicted RBP15□□□□□ -0.01
SEC13-206ENST00000397102 BIN1O00499 593 aa15□□□□□ -0.01
SEC13-206ENST00000397102 ECEL1O95672 775 aa15□□□□□ -0.01
SEC13-206ENST00000397102 PRKCGP05129 697 aa15□□□□□ -0.01
SEC13-206ENST00000397102 PRKAR1AP10644 381 aa15□□□□□ -0.01
SEC13-206ENST00000397102 ILF3Q12906 894 aaKnown RBP eCLIP15□□□□□ -0.011e-6■■■□□ 16.4
SEC13-206ENST00000397102 KLRB1Q12918 225 aa15□□□□□ -0.01
SEC13-206ENST00000397102 RALGDSQ12967 914 aa15□□□□□ -0.01
SEC13-206ENST00000397102 BIRC2Q13490 618 aa15□□□□□ -0.01
SEC13-206ENST00000397102 SQSTM1Q13501 440 aa15□□□□□ -0.01
SEC13-206ENST00000397102 CCDC14Q49A88 953 aa15□□□□□ -0.01
SEC13-206ENST00000397102 TAF3Q5VWG9 929 aa15□□□□□ -0.01
SEC13-206ENST00000397102 LIPIQ6XZB0 460 aa15□□□□□ -0.01
SEC13-206ENST00000397102 NRROSQ86YC3 692 aa15□□□□□ -0.01
SEC13-206ENST00000397102 NLGN4XQ8N0W4 816 aa15□□□□□ -0.01
SEC13-206ENST00000397102 CCDC185Q8N715 623 aa15□□□□□ -0.01
SEC13-206ENST00000397102 NLGN4YQ8NFZ3 816 aaPredicted RBP15□□□□□ -0.01
SEC13-206ENST00000397102 APOBEC4Q8WW27 367 aaKnown RBP15□□□□□ -0.01
SEC13-206ENST00000397102 RXFP2Q8WXD0 754 aa15□□□□□ -0.01
SEC13-206ENST00000397102 TEFMQ96QE5 360 aaKnown RBP15□□□□□ -0.01
SEC13-206ENST00000397102 CARS2Q9HA77 564 aaKnown RBP15□□□□□ -0.01
SEC13-206ENST00000397102 OCIAD1Q9NX40 245 aa15□□□□□ -0.01
SEC13-206ENST00000397102 TAAR2Q9P1P5 351 aa15□□□□□ -0.01
SEC13-206ENST00000397102 PILRAQ9UKJ1 303 aa15□□□□□ -0.01
SEC13-206ENST00000397102 NOTCH2Q04721 2471 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 IGHV1OR21-1A0A087WYE8 117 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 PRR19A6NJB7 356 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 RASA4BC9J798 803 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 MTSS1O43312 755 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 RASA4O43374 803 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 BUB1BO60566 1050 aaPredicted RBP14.99□□□□□ -0.01
SEC13-206ENST00000397102 ELFN1P0C7U0 828 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 MYCLP1P12525 358 aaPredicted RBP14.99□□□□□ -0.01
SEC13-206ENST00000397102 GM2AP17900 193 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 MAP4P27816 1152 aaKnown RBP14.99□□□□□ -0.01
SEC13-206ENST00000397102 OAS2P29728 719 aaKnown RBP14.99□□□□□ -0.01
SEC13-206ENST00000397102 CSF2RBP32927 897 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 PTPN9P43378 593 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 NOMO3P69849 1222 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 SEPT6Q14141 434 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 PARP15Q460N3 678 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 ANKS6Q68DC2 871 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 PNCKQ6P2M8 343 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 FAM129CQ86XR2 697 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 CAMK1DQ8IU85 385 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 NRSN1Q8IZ57 195 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 CPA5Q8WXQ8 436 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 NTAN1Q96AB6 310 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 SPRY4Q9C004 299 aa14.99□□□□□ -0.01
SEC13-206ENST00000397102 TRNAU1APQ9NX07 287 aaKnown RBP14.99□□□□□ -0.01
SEC13-206ENST00000397102 UBA2Q9UBT2 640 aaPredicted RBP14.99□□□□□ -0.01
SEC13-206ENST00000397102 LOC101059948A0A1B0GTJ6 334 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 C2CD4BA6NLJ0 364 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 EFCAB7A8K855 629 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 TEX33O43247 280 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 EPHB2P29323 1055 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 SERPINA4P29622 427 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 HDAC4P56524 1084 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 MC1RQ01726 317 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 PEX6Q13608 980 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 RAPGEF1Q13905 1077 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 DEFB109BQ30KR1 87 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 CRTC2Q53ET0 693 aaPredicted RBP14.98□□□□□ -0.01
SEC13-206ENST00000397102 NKAIN2Q5VXU1 208 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms