RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 PPM1HQ9ULR3 514 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 NOVA2Q9UNW9 492 aaKnown RBP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 ARL5AQ9Y689 179 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 REV3LO60673 3130 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 K7EQS6 105 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 LEFTY1O75610 366 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 UGT2B4P06133 528 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 SRFP11831 508 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 SP100P23497 879 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 POLD2P49005 469 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 THOC5Q13769 683 aaKnown RBP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 HSP90AA5PQ58FG0 334 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 ARSIQ5FYB1 569 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 SERPINA13PQ6UXR4 307 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 PACS1Q6VY07 963 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 TAOK1Q7L7X3 1001 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 DSG4Q86SJ6 1040 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 TRABD2AQ86V40 505 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 ZSWIM9Q86XI8 627 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 MZB1Q8WU39 189 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 CDKN2AIPNLQ96HQ2 116 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 KLHL32Q96NJ5 620 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 FBRSQ9HAH7 460 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 SSU72Q9NP77 194 aaKnown RBP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 PPANQ9NQ55 473 aaKnown RBP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 BCCIPQ9P287 314 aaKnown RBP eCLIP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 ZNF711Q9Y462 761 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 COL4A3Q01955 1670 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 SMIM23A6NLE4 172 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 STX7O15400 261 aaKnown RBP13.63□□□□□ -0.23
MCF2L-209ENST00000397036 CTSLP07711 333 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 SPRP35270 261 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-209ENST00000397036 HNF1BP35680 557 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 ABL2P42684 1182 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 IL12RB1P42701 662 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 SOX9P48436 509 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 MAGOHP61326 146 aaKnown RBP13.63□□□□□ -0.23
MCF2L-209ENST00000397036 PRAMEP78395 509 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 CAMK2GQ13555 558 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-209ENST00000397036 TDGQ13569 410 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 HSF5Q4G112 596 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-209ENST00000397036 FBXO43Q4G163 708 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 EGFLAMQ63HQ2 1017 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 TXNDC11Q6PKC3 985 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 EXOC3L1Q86VI1 746 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 RASSF3Q86WH2 238 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 SFTPA1Q8IWL2 248 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 ARFGAP2Q8N6H7 521 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 C2CD4AQ8NCU7 369 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-209ENST00000397036 OR4K2Q8NGD2 314 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 DTX3LQ8TDB6 740 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 HDAC10Q969S8 669 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 ALKBH8Q96BT7 664 aaKnown RBP13.63□□□□□ -0.23
MCF2L-209ENST00000397036 TBATAQ96M53 351 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 ZFYVE1Q9HBF4 777 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 TXNDC16Q9P2K2 825 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 CTNNAL1Q9UBT7 734 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 STON1Q9Y6Q2 735 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 PIAS3Q9Y6X2 628 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 KIAA1549LQ6ZVL6 1849 aa13.63□□□□□ -0.23
MCF2L-209ENST00000397036 MIA3Q5JRA6 1907 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 AURKAO14965 403 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 BNIP3LO60238 219 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 PRKCGP05129 697 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 PIRTP0C851 137 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 TIMP2P16035 220 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 ZNF30P17039 623 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 ITGB7P26010 798 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 ARSDP51689 593 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 SLC18A1P54219 525 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 MRPS21P82921 87 aaKnown RBP13.62□□□□□ -0.23
MCF2L-209ENST00000397036 GRSF1Q12849 480 aaKnown RBP eCLIP13.62□□□□□ -0.23
MCF2L-209ENST00000397036 ZDHHC20Q5W0Z9 365 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 KCTD16Q68DU8 428 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 AFTPHQ6ULP2 937 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 CRTC1Q6UUV9 634 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 TRMT11Q7Z4G4 463 aaKnown RBP13.62□□□□□ -0.23
MCF2L-209ENST00000397036 STK40Q8N2I9 435 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 ZNF513Q8N8E2 541 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-209ENST00000397036 OR13C4Q8NGS5 318 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 PPM1EQ8WY54 764 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 EZH1Q92800 747 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-209ENST00000397036 DNAJC1Q96KC8 554 aaKnown RBP13.62□□□□□ -0.23
MCF2L-209ENST00000397036 TCF12Q99081 682 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 GABRG3Q99928 467 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 GPR63Q9BZJ6 419 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 PRSS16Q9NQE7 514 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 IARS2Q9NSE4 1012 aaKnown RBP13.62□□□□□ -0.23
MCF2L-209ENST00000397036 TBK1Q9UHD2 729 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 PKP3Q9Y446 797 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 KCTD3Q9Y597 815 aa13.62□□□□□ -0.23
MCF2L-209ENST00000397036 HMX2A2RU54 273 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 RGSL1A5PLK6 1076 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 UPK3BL1B0FP48 263 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 UPK3BL2E5RIL1 263 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 MAN2B1O00754 1011 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 PIAS1O75925 651 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 CYP2A6P11509 494 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-209ENST00000397036 KRT15P19012 456 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 OGNP20774 298 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms