RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 TOE1Q96GM8 510 aaKnown RBP10.62□□□□□ -0.71
NUP98-205ENST00000397007 VPS35Q96QK1 796 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 TBL1YQ9BQ87 522 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 ERP44Q9BS26 406 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 FAM129AQ9BZQ8 928 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 A0A1W2PPC4 97 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 RAD51BO15315 384 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 CHRNA4P43681 627 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 MSS51Q4VC12 460 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 ANO7Q6IWH7 933 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 TMEM135Q86UB9 458 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 IQCHQ86VS3 1027 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 SLC22A18ASQ8N1D0 253 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 HDDC3Q8N4P3 179 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 CCHCR1Q8TD31 782 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 HMGB4Q8WW32 186 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 BIRC7Q96CA5 298 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 BMFQ96LC9 184 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 SRPK1Q96SB4 655 aaKnown RBP10.62□□□□□ -0.71
NUP98-205ENST00000397007 SHOC2Q9UQ13 582 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 CHKBQ9Y259 395 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 PTPN5P54829 565 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 PEX6Q13608 980 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 HORMAD1Q86X24 394 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 PLEKHG4BQ96PX9 1271 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 TRABDQ9H4I3 376 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 ZNF711Q9Y462 761 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 TEX264Q9Y6I9 313 aa10.62□□□□□ -0.71
NUP98-205ENST00000397007 SMAPO00193 183 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 SGTAO43765 313 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 DR1Q01658 176 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 SRSF5Q13243 272 aaKnown RBP10.61□□□□□ -0.71
NUP98-205ENST00000397007 MORF4L2Q15014 288 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 SHBQ15464 509 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 TRADDQ15628 312 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 ARMC12Q5T9G4 340 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 PID1Q7Z2X4 250 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 BBS5Q8N3I7 341 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 RUBCNQ92622 972 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 CAPZA3Q96KX2 299 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 TBATAQ96M53 351 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 HS3ST3A1Q9Y663 406 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 ECEL1O95672 775 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 SEMA4FO95754 770 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 DNTTP04053 509 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 CKAP4Q07065 602 aaKnown RBP10.61□□□□□ -0.71
NUP98-205ENST00000397007 SEL1L3Q68CR1 1132 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 PTCD2Q8WV60 388 aaKnown RBP10.61□□□□□ -0.71
NUP98-205ENST00000397007 TRIM44Q96DX7 344 aaPredicted RBP10.61□□□□□ -0.71
NUP98-205ENST00000397007 SERPINB12Q96P63 405 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 NLE1Q9NVX2 485 aaPredicted RBP10.61□□□□□ -0.71
NUP98-205ENST00000397007 KLHL8Q9P2G9 620 aaPredicted RBP10.61□□□□□ -0.71
NUP98-205ENST00000397007 DMTF1Q9Y222 760 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 ZCWPW2A0A1B0GU75 182 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 ALPIP09923 528 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 IGFALSP35858 605 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 SPINT3P49223 89 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 ELP6Q0PNE2 266 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 TAF1AQ15573 450 aaPredicted RBP10.61□□□□□ -0.71
NUP98-205ENST00000397007 ADAMTSL4Q6UY14 1074 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 KYAT3Q6YP21 454 aaKnown RBP10.61□□□□□ -0.71
NUP98-205ENST00000397007 PDCD7Q8N8D1 485 aaKnown RBP10.61□□□□□ -0.71
NUP98-205ENST00000397007 FAM174AQ8TBP5 190 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 BRSK1Q8TDC3 778 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 TRIM51Q9BSJ1 452 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 LRRC1Q9BTT6 524 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 TPSD1Q9BZJ3 242 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 ANKZF1Q9H8Y5 726 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 TMEM74BQ9NUR3 256 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 ZNF148Q9UQR1 794 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 PCDHB9Q9Y5E1 797 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 PCDHGA5Q9Y5G8 931 aa10.61□□□□□ -0.71
NUP98-205ENST00000397007 IL1BP01584 269 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 C6P13671 934 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 RPS21P63220 83 aaKnown RBP10.6□□□□□ -0.71
NUP98-205ENST00000397007 TPRG1LQ5T0D9 272 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 FNBP1LQ5T0N5 605 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 LRRC66Q68CR7 880 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 SLC23A3Q6PIS1 610 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 CYS1Q717R9 158 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 CNTN4Q8IWV2 1026 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 PPIL6Q8IXY8 311 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 EPB41L4BQ9H329 900 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 SEMA4AQ9H3S1 761 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 HAUS2Q9NVX0 235 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 CYP8B1Q9UNU6 501 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 ABCA7Q8IZY2 2146 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 RNASEH1O60930 286 aaKnown RBP10.6□□□□□ -0.71
NUP98-205ENST00000397007 RPP40O75818 363 aaKnown RBP10.6□□□□□ -0.71
NUP98-205ENST00000397007 CD27P26842 260 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 POLR2LP62875 67 aaKnown RBP10.6□□□□□ -0.71
NUP98-205ENST00000397007 GALNT3Q14435 633 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 TTC31Q49AM3 519 aaPredicted RBP10.6□□□□□ -0.71
NUP98-205ENST00000397007 RFLNAQ6ZTI6 216 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 GALNT7Q86SF2 657 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 NSMCE1Q8WV22 266 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 KRT12Q99456 494 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 DMGDHQ9UI17 866 aaKnown RBP10.6□□□□□ -0.71
NUP98-205ENST00000397007 SPEGQ15772 3267 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 FADS2P1A8MWK0 482 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms