RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 SERPINB6P35237 376 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 BLKP51451 505 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 CNGA3Q16281 694 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 SLC18A3Q16572 532 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 HADHQ16836 314 aaKnown RBP18.35■□□□□ 0.53
FXN-203ENST00000396366 ANKRD20A8PQ5CZ79 823 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 HSD11B1LQ7Z5J1 315 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 SFTPA2Q8IWL1 248 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 FSTL5Q8N475 847 aaPredicted RBP18.35■□□□□ 0.53
FXN-203ENST00000396366 KCTD6Q8NC69 237 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 OR8K1Q8NGG5 319 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 COQ10AQ96MF6 247 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 DNAJC7Q99615 494 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 CHP1Q99653 195 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 FGF22Q9HCT0 170 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 EVA1BQ9NVM1 165 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 NCKIPSDQ9NZQ3 722 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 RCOR3Q9P2K3 495 aaPredicted RBP18.35■□□□□ 0.53
FXN-203ENST00000396366 PADI4Q9UM07 663 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 DOLKQ9UPQ8 538 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 A0A1W2PNU3 283 aaPredicted RBP18.34■□□□□ 0.53
FXN-203ENST00000396366 SOCS5O75159 536 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 TNFP01375 233 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 PDHA1P08559 390 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 LHCGRP22888 699 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 TRIM23P36406 574 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 HSPA9P38646 679 aaKnown RBP18.34■□□□□ 0.53
FXN-203ENST00000396366 ITKQ08881 620 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 GALNT2Q10471 571 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 PAFAH1B3Q15102 231 aaKnown RBP18.34■□□□□ 0.53
FXN-203ENST00000396366 ELOCQ15369 112 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 ISXQ2M1V0 245 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 SKOR2Q2VWA4 1001 aaPredicted RBP18.34■□□□□ 0.53
FXN-203ENST00000396366 FAM182AQ5T1J6 154 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 SPECC1LQ69YQ0 1117 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 PNCKQ6P2M8 343 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 TSPAN33Q86UF1 283 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 CBARPQ8N350 705 aaPredicted RBP18.34■□□□□ 0.53
FXN-203ENST00000396366 TEX26Q8N6G2 289 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 PQLC3Q8N755 202 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 KYQ8NBH2 561 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 RNF214Q8ND24 703 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 NSMCE1Q8WV22 266 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 SPOCK2Q92563 424 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 SEMA3CQ99985 751 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 CCDC3Q9BQI4 270 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 RABGEF1Q9UJ41 708 aa18.34■□□□□ 0.53
FXN-203ENST00000396366 BPTFQ12830 3046 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 NPIPB15A6NHN6 443 aaPredicted RBP18.33■□□□□ 0.52
FXN-203ENST00000396366 CACNB4O00305 520 aaPredicted RBP18.33■□□□□ 0.52
FXN-203ENST00000396366 HEXIM1O94992 359 aaKnown RBP18.33■□□□□ 0.52
FXN-203ENST00000396366 PGLSO95336 258 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 TPM3P06753 285 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 ALPIP09923 528 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 H2AFZP0C0S5 128 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 VIPR1P32241 457 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 ETV3P41162 512 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 GARSP41250 739 aaKnown RBP18.33■□□□□ 0.52
FXN-203ENST00000396366 RPIAP49247 311 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 KIAA1024LP59773 190 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 GABREP78334 506 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 ESRP1Q6NXG1 681 aaKnown RBP18.33■□□□□ 0.52
FXN-203ENST00000396366 RFLNAQ6ZTI6 216 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 H2AFVQ71UI9 128 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 BBS5Q8N3I7 341 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 OR56A4Q8NGH8 313 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 CCL4L1Q8NHW4 92 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 PIH1D2Q8WWB5 315 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 CTNNBL1Q8WYA6 563 aaPredicted RBP18.33■□□□□ 0.52
FXN-203ENST00000396366 FGF11Q92914 225 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 GLMNQ92990 594 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 NUS1Q96E22 293 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 ATXN7L3BQ96GX2 97 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 RBM15Q96T37 977 aaKnown RBP eCLIP18.33■□□□□ 0.52
FXN-203ENST00000396366 TMEM168Q9H0V1 697 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 UVRAGQ9P2Y5 699 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 PHTF1Q9UMS5 762 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 GPR34Q9UPC5 381 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 RAI2Q9Y5P3 530 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 DGKBQ9Y6T7 804 aa18.33■□□□□ 0.52
FXN-203ENST00000396366 KIF26BQ2KJY2 2108 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 PMS2P1A4D2B8 440 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 FUCA1P04066 466 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 DSC2Q02487 901 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 GBE1Q04446 702 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 SLC10A2Q12908 348 aaPredicted RBP18.32■□□□□ 0.52
FXN-203ENST00000396366 MESDQ14696 234 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 TBC1D25Q3MII6 688 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 LVRNQ6Q4G3 990 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 Q6ZVL8 140 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 VSTM4Q8IW00 320 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 ARL10Q8N8L6 244 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 ATL2Q8NHH9 583 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 SLC35G2Q8TBE7 412 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 PTCD2Q8WV60 388 aaKnown RBP18.32■□□□□ 0.52
FXN-203ENST00000396366 SCG3Q8WXD2 468 aaKnown RBP18.32■□□□□ 0.52
FXN-203ENST00000396366 RAPGEF5Q92565 580 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 SCRN2Q96FV2 425 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 TSPY26PQ9H489 355 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 DEF6Q9H4E7 631 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms