RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 FSTL4Q6MZW2 842 aa15.46■□□□□ 0.07
VAMP1-202ENST00000396308 CES3Q6UWW8 571 aa15.46■□□□□ 0.07
VAMP1-202ENST00000396308 LMNTD2Q8IXW0 634 aa15.46■□□□□ 0.07
VAMP1-202ENST00000396308 PPM1NQ8N819 430 aa15.46■□□□□ 0.07
VAMP1-202ENST00000396308 PIP4K2CQ8TBX8 421 aa15.46■□□□□ 0.07
VAMP1-202ENST00000396308 EPS8L3Q8TE67 593 aaKnown RBP15.46■□□□□ 0.07
VAMP1-202ENST00000396308 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.46■□□□□ 0.07
VAMP1-202ENST00000396308 PAFAH2Q99487 392 aa15.46■□□□□ 0.07
VAMP1-202ENST00000396308 MTG2Q9H4K7 406 aa15.46■□□□□ 0.07
VAMP1-202ENST00000396308 VPS18Q9P253 973 aa15.46■□□□□ 0.07
VAMP1-202ENST00000396308 NFS1Q9Y697 457 aa15.46■□□□□ 0.07
VAMP1-202ENST00000396308 SPTBN5Q9NRC6 3674 aaKnown RBP15.46■□□□□ 0.06
VAMP1-202ENST00000396308 IQANK1A0A1B0GTG1 560 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 FAM159BA6NKW6 160 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 LDB2O43679 373 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 VAPBO95292 243 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 KLF8O95600 359 aaPredicted RBP15.45■□□□□ 0.06
VAMP1-202ENST00000396308 PRKCGP05129 697 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 ALPIP09923 528 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 HOXB2P14652 356 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 ZNF30P17039 623 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 SLC8A1P32418 973 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 KIR2DL1P43626 348 aaPredicted RBP15.45■□□□□ 0.06
VAMP1-202ENST00000396308 SLCO1A2P46721 670 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 PSMD8P48556 350 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 SERPINB9P50453 376 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 ELP6Q0PNE2 266 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 SFSWAPQ12872 951 aaKnown RBP15.45■□□□□ 0.06
VAMP1-202ENST00000396308 ENPP2Q13822 863 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 UGP2Q16851 508 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 UBAP2Q5T6F2 1119 aaKnown RBP15.45■□□□□ 0.06
VAMP1-202ENST00000396308 ZNF776Q68DI1 518 aaPredicted RBP15.45■□□□□ 0.06
VAMP1-202ENST00000396308 FBXL19Q6PCT2 694 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 AFTPHQ6ULP2 937 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 MARK2Q7KZI7 788 aaKnown RBP15.45■□□□□ 0.06
VAMP1-202ENST00000396308 SLC26A11Q86WA9 606 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 OR6P1Q8NGX9 317 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 PBXIP1Q96AQ6 731 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 SCRN2Q96FV2 425 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 NSMCE3Q96MG7 304 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 C19orf43Q9BQ61 176 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 TRIM56Q9BRZ2 755 aaKnown RBP15.45■□□□□ 0.06
VAMP1-202ENST00000396308 ZFYVE1Q9HBF4 777 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 FBRSL1Q9HCM7 1045 aaKnown RBP15.45■□□□□ 0.06
VAMP1-202ENST00000396308 PRSS16Q9NQE7 514 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 ARHGEF3Q9NR81 526 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 RAD18Q9NS91 495 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 TREX1Q9NSU2 369 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 NLE1Q9NVX2 485 aaPredicted RBP15.45■□□□□ 0.06
VAMP1-202ENST00000396308 POLR3BQ9NW08 1133 aaPredicted RBP15.45■□□□□ 0.06
VAMP1-202ENST00000396308 MOCS1Q9NZB8 636 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 BCCIPQ9P287 314 aaKnown RBP eCLIP15.45■□□□□ 0.06
VAMP1-202ENST00000396308 NDRG2Q9UN36 371 aaKnown RBP15.45■□□□□ 0.06
VAMP1-202ENST00000396308 SPO11Q9Y5K1 396 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 ARL5AQ9Y689 179 aa15.45■□□□□ 0.06
VAMP1-202ENST00000396308 ZCWPW2A0A1B0GU75 182 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 C16orf96A6NNT2 1141 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 SLC7A4O43246 635 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 KRT38O76015 456 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 CNTFP26441 200 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 VIPR1P32241 457 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 HNF1BP35680 557 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 WASP42768 502 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 NEK3P51956 506 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 ZNF140P52738 457 aaPredicted RBP15.44■□□□□ 0.06
VAMP1-202ENST00000396308 CAMK2GQ13555 558 aaPredicted RBP15.44■□□□□ 0.06
VAMP1-202ENST00000396308 TMED2Q15363 201 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 CNGA3Q16281 694 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 EMC10Q5UCC4 262 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 ZDHHC20Q5W0Z9 365 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 MRNIPQ6NTE8 343 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 ESRP1Q6NXG1 681 aaKnown RBP15.44■□□□□ 0.06
VAMP1-202ENST00000396308 LYSMD3Q7Z3D4 306 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 TTC7BQ86TV6 843 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 TDRPQ86YL5 185 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 UBALD2Q8IYN6 164 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 OR2T3Q8NH03 318 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 MRRFQ96E11 262 aaKnown RBP15.44■□□□□ 0.06
VAMP1-202ENST00000396308 DNAJC1Q96KC8 554 aaKnown RBP15.44■□□□□ 0.06
VAMP1-202ENST00000396308 FCRL3Q96P31 734 aaPredicted RBP15.44■□□□□ 0.06
VAMP1-202ENST00000396308 MCCC1Q96RQ3 725 aaPredicted RBP15.44■□□□□ 0.06
VAMP1-202ENST00000396308 LYSMD1Q96S90 227 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 ACOX2Q99424 681 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 CPNE1Q99829 537 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 GABRG3Q99928 467 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 PRDM6Q9NQX0 595 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 PKD2L2Q9NZM6 624 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 PPM1HQ9ULR3 514 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 CA14Q9ULX7 337 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 PPIL1Q9Y3C6 166 aa15.44■□□□□ 0.06
VAMP1-202ENST00000396308 HMGB1P1B2RPK0 211 aaPredicted RBP15.43■□□□□ 0.06
VAMP1-202ENST00000396308 RNF40O75150 1001 aa15.43■□□□□ 0.06
VAMP1-202ENST00000396308 KRT37O76014 449 aa15.43■□□□□ 0.06
VAMP1-202ENST00000396308 CTSLP07711 333 aa15.43■□□□□ 0.06
VAMP1-202ENST00000396308 ERVK-10P10266 1014 aa15.43■□□□□ 0.06
VAMP1-202ENST00000396308 HMGCLP35914 325 aa15.43■□□□□ 0.06
VAMP1-202ENST00000396308 TMPRSS15P98073 1019 aa15.43■□□□□ 0.06
VAMP1-202ENST00000396308 ACVR1Q04771 509 aa15.43■□□□□ 0.06
VAMP1-202ENST00000396308 MSLNQ13421 630 aaPredicted RBP15.43■□□□□ 0.06
VAMP1-202ENST00000396308 EFTUD2Q15029 972 aaKnown RBP eCLIP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms