RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CA14Q9ULX7 337 aa15.19■□□□□ 0.02
SCAF11-204ENST00000395454 KIAA1549LQ6ZVL6 1849 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.18■□□□□ 0.02
SCAF11-204ENST00000395454 PRKCGP05129 697 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 BPGMP07738 259 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 CISD3P0C7P0 127 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 PAMP19021 973 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 CR2P20023 1033 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 PDE1BQ01064 536 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 PLEKHG6Q3KR16 790 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 GALNTL6Q49A17 601 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 KIAA0408Q6ZU52 694 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 TPRG1Q6ZUI0 275 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 LCA5Q86VQ0 697 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 APCDD1Q8J025 514 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 AHI1Q8N157 1196 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 GBP7Q8N8V2 638 aaPredicted RBP15.18■□□□□ 0.02
SCAF11-204ENST00000395454 C10orf82Q8WW14 230 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 VPS39Q96JC1 886 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 C7orf26Q96N11 449 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 UHRF1Q96T88 793 aaPredicted RBP15.18■□□□□ 0.02
SCAF11-204ENST00000395454 P2RY13Q9BPV8 354 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 SLC13A1Q9BZW2 595 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 SEPT3Q9UH03 358 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 SLC12A4Q9UP95 1085 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 SLC27A6Q9Y2P4 619 aa15.18■□□□□ 0.02
SCAF11-204ENST00000395454 BDP1A6H8Y1 2624 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 TBC1D3BA6NDS4 549 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 CBX4O00257 560 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 PLIN3O60664 434 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 KAT7O95251 611 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 MPOP05164 745 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 HLA-DPA1P20036 260 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 CD72P21854 359 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 GALK1P51570 392 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 ACVR1Q04771 509 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 SLC12A1Q13621 1099 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 ZNF235Q14590 738 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 PON2Q15165 354 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 MLF2Q15773 248 aaPredicted RBP15.17■□□□□ 0.02
SCAF11-204ENST00000395454 SPRED3Q2MJR0 410 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 FUT11Q495W5 492 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 PREPLQ4J6C6 727 aaPredicted RBP15.17■□□□□ 0.02
SCAF11-204ENST00000395454 PITRM1Q5JRX3 1037 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 ESRP1Q6NXG1 681 aaKnown RBP15.17■□□□□ 0.02
SCAF11-204ENST00000395454 NLRP9Q7RTR0 991 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 UBALD2Q8IYN6 164 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.17■□□□□ 0.02
SCAF11-204ENST00000395454 TERB1Q8NA31 727 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 ARMC2Q8NEN0 867 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 TRIB3Q96RU7 358 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 SEMA3CQ99985 751 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 CIPCQ9C0C6 399 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 FBRSL1Q9HCM7 1045 aaKnown RBP15.17■□□□□ 0.02
SCAF11-204ENST00000395454 IARS2Q9NSE4 1012 aaKnown RBP15.17■□□□□ 0.02
SCAF11-204ENST00000395454 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.17■□□□□ 0.02
SCAF11-204ENST00000395454 INTS6Q9UL03 887 aaKnown RBP15.17■□□□□ 0.02
SCAF11-204ENST00000395454 RIMKLBQ9ULI2 386 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 SNNO75324 88 aaPredicted RBP15.17■□□□□ 0.02
SCAF11-204ENST00000395454 FGF1P05230 155 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 GLULP15104 373 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 CES1P23141 567 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 GLDCP23378 1020 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 GABRB3P28472 473 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 TYK2P29597 1187 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 SIRPB2Q5JXA9 342 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 SPDYAQ5MJ70 313 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 TSTD2Q5T7W7 516 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 BBS5Q8N3I7 341 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 PHTF2Q8N3S3 785 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 C2CD4AQ8NCU7 369 aaPredicted RBP15.17■□□□□ 0.02
SCAF11-204ENST00000395454 FAM3CQ92520 227 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 LMLNQ96KR4 655 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 RMDN2Q96LZ7 410 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 FAM167BQ9BTA0 163 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 C2orf49Q9BVC5 232 aaPredicted RBP15.17■□□□□ 0.02
SCAF11-204ENST00000395454 TSSK1BQ9BXA7 367 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 ARHGEF3Q9NR81 526 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 ABCF3Q9NUQ8 709 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 UBA2Q9UBT2 640 aaPredicted RBP15.17■□□□□ 0.02
SCAF11-204ENST00000395454 OR51B4Q9Y5P0 310 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 USH1CQ9Y6N9 552 aa15.17■□□□□ 0.02
SCAF11-204ENST00000395454 ATG2BQ96BY7 2078 aa15.16■□□□□ 0.02
SCAF11-204ENST00000395454 TTC28Q96AY4 2481 aa15.16■□□□□ 0.02
SCAF11-204ENST00000395454 PROCP04070 461 aa15.16■□□□□ 0.02
SCAF11-204ENST00000395454 APODP05090 189 aa15.16■□□□□ 0.02
SCAF11-204ENST00000395454 BGNP21810 368 aa15.16■□□□□ 0.02
SCAF11-204ENST00000395454 CDK18Q07002 472 aa15.16■□□□□ 0.02
SCAF11-204ENST00000395454 ACTN3Q08043 901 aaPredicted RBP15.16■□□□□ 0.02
SCAF11-204ENST00000395454 CNGA3Q16281 694 aa15.16■□□□□ 0.02
SCAF11-204ENST00000395454 PCSK7Q16549 785 aa15.16■□□□□ 0.02
SCAF11-204ENST00000395454 TMEM215Q68D42 235 aa15.16■□□□□ 0.02
SCAF11-204ENST00000395454 NUDT18Q6ZVK8 323 aa15.16■□□□□ 0.02
SCAF11-204ENST00000395454 ADIPOR2Q86V24 386 aa15.16■□□□□ 0.02
SCAF11-204ENST00000395454 SFTPA1Q8IWL2 248 aa15.16■□□□□ 0.02
SCAF11-204ENST00000395454 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.16■□□□□ 0.02
SCAF11-204ENST00000395454 ALG14Q96F25 216 aa15.16■□□□□ 0.02
SCAF11-204ENST00000395454 MSANTD3Q96H12 275 aa15.16■□□□□ 0.02
SCAF11-204ENST00000395454 WNT16Q9UBV4 365 aa15.16■□□□□ 0.02
SCAF11-204ENST00000395454 MTO1Q9Y2Z2 717 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms