RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 RAI2Q9Y5P3 530 aa13.41□□□□□ -0.26
HLA-DMA-202ENST00000395303 FREM2Q5SZK8 3169 aa13.41□□□□□ -0.26
HLA-DMA-202ENST00000395303 HACD1B0YJ81 288 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 APOC4-APOC2K7ER74 178 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 PSMD11O00231 422 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 NEBLO76041 1014 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 DKK1O94907 266 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 HEXIM1O94992 359 aaKnown RBP13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 APOC2P02655 101 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 PDHA1P08559 390 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 CYP2A6P11509 494 aaPredicted RBP13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 RWDD2BP57060 319 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 RPL26P61254 145 aaKnown RBP13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 DYNLT1P63172 113 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 SKOR1P84550 965 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 ITKQ08881 620 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 AP1B1Q10567 949 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 BNIP3Q12983 259 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 XRCC4Q13426 336 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 LRRC14Q15048 493 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 IRF4Q15306 451 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 TRIP6Q15654 476 aaKnown RBP13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 INAVAQ3KP66 663 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 TEX44Q53QW1 395 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 TPRG1LQ5T0D9 272 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 KAZNQ674X7 775 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 CCDC50Q8IVM0 306 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 LRRC8AQ8IWT6 810 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 RHBDD1Q8TEB9 315 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 TFB1MQ8WVM0 346 aaKnown RBP13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 ALG3Q92685 438 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 P3H4Q92791 437 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 CDC6Q99741 560 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 OSBPL8Q9BZF1 889 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 TSGA10Q9BZW7 698 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 KCTD5Q9NXV2 234 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 SAE1Q9UBE0 346 aaPredicted RBP13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 AMFRQ9UKV5 643 aa13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 RPL26L1Q9UNX3 145 aaKnown RBP13.4□□□□□ -0.26
HLA-DMA-202ENST00000395303 A0A0J9YYE9 177 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 MACROD2A1Z1Q3 448 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 NPIPB15A6NHN6 443 aaPredicted RBP13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 MIF4GDA9UHW6 222 aaKnown RBP13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 DDX3YO15523 660 aaKnown RBP13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 MTSS1O43312 755 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 LZTS3O60299 673 aaPredicted RBP13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 RECQL5O94762 991 aaPredicted RBP13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 TRBC1P01850 177 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 ELFN1P0C7U0 828 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 CA4P22748 312 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 PTPN3P26045 913 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 CCZ1BP86790 482 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 CCZ1P86791 482 aaPredicted RBP13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 IL9RQ01113 521 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 SEMG2Q02383 582 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 MTM1Q13496 603 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 NOMO1Q15155 1222 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 CNGA3Q16281 694 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 GATAD2AQ86YP4 633 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 RAVER1Q8IY67 606 aaKnown RBP13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 NDUFAF2Q8N183 169 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 SETD7Q8WTS6 366 aaKnown RBP13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 PDCD6IPQ8WUM4 868 aaKnown RBP13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 IMP4Q96G21 291 aaKnown RBP13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 TEKT5Q96M29 485 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 LYSMD1Q96S90 227 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 HERPUD2Q9BSE4 406 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 SLC25A51Q9H1U9 297 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 GRPEL1Q9HAV7 217 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 CAPN6Q9Y6Q1 641 aa13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 ZNF106Q9H2Y7 1883 aaKnown RBP13.39□□□□□ -0.27
HLA-DMA-202ENST00000395303 SPAARA0A1B0GVQ0 90 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 TMEM8BA6NDV4 472 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 KRT86O43790 486 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 HYAL3O43820 417 aaPredicted RBP13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 PIAS2O75928 621 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 CSF2P04141 144 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 ITGAVP06756 1048 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 HOXC4P09017 264 aaPredicted RBP13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 NME1P15531 152 aaKnown RBP13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 ZNF30P17039 623 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 LHCGRP22888 699 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 DGKAP23743 735 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 TRIM23P36406 574 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 CD86P42081 329 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 SIM1P81133 766 aaPredicted RBP13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 WASHC5Q12768 1159 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 EIF2B5Q13144 721 aaKnown RBP13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 PTK2BQ14289 1009 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 LLGL1Q15334 1064 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 ESRP1Q6NXG1 681 aaKnown RBP13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 KDM7AQ6ZMT4 941 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 MACC1Q6ZN28 852 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 USP45Q70EL2 814 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 PEX26Q7Z412 305 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 PARGQ86W56 976 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 DTD2Q96FN9 168 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 HES6Q96HZ4 224 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 TBATAQ96M53 351 aa13.38□□□□□ -0.27
HLA-DMA-202ENST00000395303 QKIQ96PU8 341 aaKnown RBP eCLIP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms