RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 PTCD2Q8WV60 388 aaKnown RBP17.25■□□□□ 0.35
SIN3A-203ENST00000394949 ITCHQ96J02 903 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 ZNF570Q96NI8 536 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 TDRD1Q9BXT4 1180 aaKnown RBP17.25■□□□□ 0.35
SIN3A-203ENST00000394949 RGS10O43665 173 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 TULP3O75386 442 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 FAM155BO75949 473 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 CAPGP40121 348 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 BTG3Q14201 252 aaPredicted RBP17.25■□□□□ 0.35
SIN3A-203ENST00000394949 PCBP1Q15365 356 aaKnown RBP eCLIP17.25■□□□□ 0.354e-6■■■■■ 29.7
SIN3A-203ENST00000394949 PTPN20Q4JDL3 420 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 DEFB128Q7Z7B8 93 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 GPR180Q86V85 440 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 SDCBP2Q9H190 292 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 IFT80Q9P2H3 777 aaPredicted RBP17.25■□□□□ 0.35
SIN3A-203ENST00000394949 TMEM131LA2VDJ0 1609 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 FOXO6A8MYZ6 492 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 BTN3A3O00478 584 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 LSM1O15116 133 aaKnown RBP17.25■□□□□ 0.35
SIN3A-203ENST00000394949 PTPN1P18031 435 aaKnown RBP17.25■□□□□ 0.35
SIN3A-203ENST00000394949 ADCYAP1R1P41586 468 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 CENPAP49450 140 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 ACLYP53396 1101 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 SHROOM1Q2M3G4 852 aaPredicted RBP17.25■□□□□ 0.35
SIN3A-203ENST00000394949 SPPL2CQ8IUH8 684 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 SENP8Q96LD8 212 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 ADI1Q9BV57 179 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 UXTQ9UBK9 157 aaPredicted RBP17.25■□□□□ 0.35
SIN3A-203ENST00000394949 NOCTQ9UK39 431 aaKnown RBP17.25■□□□□ 0.35
SIN3A-203ENST00000394949 NRCAMQ92823 1304 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 LRCH4O75427 683 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 USP17L7P0C7H9 530 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 RPL38P63173 70 aaKnown RBP17.24■□□□□ 0.35
SIN3A-203ENST00000394949 CTBP1Q13363 440 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 PLCL1Q15111 1095 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 TIGD2Q4W5G0 525 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 RAB43Q86YS6 212 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 C10orf53Q8N6V4 93 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 CDYL2Q8N8U2 506 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 KLHL32Q96NJ5 620 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 MAFO75444 373 aaPredicted RBP17.24■□□□□ 0.35
SIN3A-203ENST00000394949 NFICP08651 508 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 CELF3Q5SZQ8 465 aaKnown RBP17.24■□□□□ 0.35
SIN3A-203ENST00000394949 GLYATQ6IB77 296 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 CD320Q9NPF0 282 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 STOML2Q9UJZ1 356 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 RALGDSQ12967 914 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 KCTD19Q17RG1 926 aaPredicted RBP17.24■□□□□ 0.35
SIN3A-203ENST00000394949 SAPCD2Q86UD0 394 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 PLD5Q8N7P1 536 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 ZCCHC2Q9C0B9 1178 aaKnown RBP17.24■□□□□ 0.35
SIN3A-203ENST00000394949 CAB39LQ9H9S4 337 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 HMX1Q9NP08 348 aaPredicted RBP17.24■□□□□ 0.35
SIN3A-203ENST00000394949 ANGPT4Q9Y264 503 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 MYPNQ86TC9 1320 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 LINC00032P0C843 101 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 TYMPP19971 482 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 SLC5A3P53794 718 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 ARL13AQ5H913 290 aaPredicted RBP17.24■□□□□ 0.35
SIN3A-203ENST00000394949 GPATCH1Q9BRR8 931 aaKnown RBP17.24■□□□□ 0.35
SIN3A-203ENST00000394949 PCDHGC3Q9UN70 934 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 WDR37Q9Y2I8 494 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 SLIT3O75094 1523 aa17.24■□□□□ 0.35
SIN3A-203ENST00000394949 DHX15O43143 795 aaKnown RBP17.23■□□□□ 0.35
SIN3A-203ENST00000394949 CD86P42081 329 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 SRP54P61011 504 aaKnown RBP17.23■□□□□ 0.35
SIN3A-203ENST00000394949 RALGPS1Q5JS13 557 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 ANKRD22Q5VYY1 191 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 PIGZQ86VD9 579 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 CYP4X1Q8N118 509 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 ZNF671Q8TAW3 534 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 NACC2Q96BF6 587 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 GAD1Q99259 594 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 TINF2Q9BSI4 451 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 C12orf65Q9H3J6 166 aaKnown RBP17.23■□□□□ 0.35
SIN3A-203ENST00000394949 KCNU1A8MYU2 1149 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 S100A9P06702 114 aaKnown RBP17.23■□□□□ 0.35
SIN3A-203ENST00000394949 PAX3P23760 479 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 CRATP43155 626 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 VGLL4Q14135 290 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 PMF1Q6P1K2 205 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 PLET1Q6UQ28 207 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 SH3BP5LQ7L8J4 393 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 UNC5BQ8IZJ1 945 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 ZNF557Q8N988 423 aaPredicted RBP17.23■□□□□ 0.35
SIN3A-203ENST00000394949 UXS1Q8NBZ7 420 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 PHF10Q8WUB8 498 aaKnown RBP17.23■□□□□ 0.35
SIN3A-203ENST00000394949 FAR1Q8WVX9 515 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 HTRA1Q92743 480 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 MED8Q96G25 268 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 SERAC1Q96JX3 654 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 GNPTGQ9UJJ9 305 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 NOS3P29474 1203 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 ALDH9A1P49189 494 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 CSNK2BP67870 215 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 IRF8Q02556 426 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 CDK18Q07002 472 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 STARD3Q14849 445 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 HERC3Q15034 1050 aa17.23■□□□□ 0.35
SIN3A-203ENST00000394949 PRKD1Q15139 912 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms