RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 PIH1D2Q8WWB5 315 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 BAG1Q99933 345 aaPredicted RBP30.82■■■□□ 2.52
CMTM4-202ENST00000394106 TMEM121BQ9BXQ6 578 aaPredicted RBP30.82■■■□□ 2.52
CMTM4-202ENST00000394106 SLC13A1Q9BZW2 595 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 SEPT10Q9P0V9 454 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 REXO2Q9Y3B8 237 aaKnown RBP30.82■■■□□ 2.52
CMTM4-202ENST00000394106 K7ESM1 405 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 PPP1R12AO14974 1030 aaPredicted RBP30.81■■■□□ 2.52
CMTM4-202ENST00000394106 HEXIM1O94992 359 aaKnown RBP30.81■■■□□ 2.52
CMTM4-202ENST00000394106 ALPIP09923 528 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 MARCKSL1P49006 195 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 PPARDQ03181 441 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 ZBTB17Q13105 803 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 NFATC4Q14934 902 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 FAM182AQ5T1J6 154 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 ENPP7Q6UWV6 458 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 B4GALNT4Q76KP1 1039 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 TMPRSS7Q7RTY8 843 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 NDUFAF2Q8N183 169 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 SCRN2Q96FV2 425 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 COQ10AQ96MF6 247 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 OLFM3Q96PB7 478 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 CEP41Q9BYV8 373 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 SPASTQ9UBP0 616 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 CHKBQ9Y259 395 aa30.81■■■□□ 2.52
CMTM4-202ENST00000394106 FZD6O60353 706 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 C1SP09871 688 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 LHCGRP22888 699 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 CDC25BP30305 580 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 EPHB1P54762 984 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 IFI35P80217 286 aaPredicted RBP30.8■■■□□ 2.52
CMTM4-202ENST00000394106 C1orf61Q13536 156 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 ARHGEF7Q14155 803 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 TFDP2Q14188 446 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 PRRT3Q5FWE3 981 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 TSPAN33Q86UF1 283 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 MARCH9Q86YJ5 346 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 CCDC50Q8IVM0 306 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 KATNAL2Q8IYT4 538 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 GALNT15Q8N3T1 639 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 NUS1Q96E22 293 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 SMIM14Q96QK8 99 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 MCCC1Q96RQ3 725 aaPredicted RBP30.8■■■□□ 2.52
CMTM4-202ENST00000394106 IL12RB2Q99665 862 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 SBDSQ9Y3A5 250 aaKnown RBP eCLIP30.8■■■□□ 2.52
CMTM4-202ENST00000394106 CSNK1G3Q9Y6M4 447 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 DUSP10Q9Y6W6 482 aa30.8■■■□□ 2.52
CMTM4-202ENST00000394106 CST8O60676 142 aa30.79■■■□□ 2.52
CMTM4-202ENST00000394106 PROS1P07225 676 aa30.79■■■□□ 2.52
CMTM4-202ENST00000394106 MYF5P13349 255 aa30.79■■■□□ 2.52
CMTM4-202ENST00000394106 CA4P22748 312 aa30.79■■■□□ 2.52
CMTM4-202ENST00000394106 TAZQ16635 292 aa30.79■■■□□ 2.52
CMTM4-202ENST00000394106 ST3GAL2Q16842 350 aa30.79■■■□□ 2.52
CMTM4-202ENST00000394106 DEFB133Q30KQ1 61 aa30.79■■■□□ 2.52
CMTM4-202ENST00000394106 CCNI2Q6ZMN8 369 aaPredicted RBP30.79■■■□□ 2.52
CMTM4-202ENST00000394106 RD3Q7Z3Z2 195 aa30.79■■■□□ 2.52
CMTM4-202ENST00000394106 HSD11B1LQ7Z5J1 315 aa30.79■■■□□ 2.52
CMTM4-202ENST00000394106 HID1Q8IV36 788 aa30.79■■■□□ 2.52
CMTM4-202ENST00000394106 TSACCQ96A04 125 aaPredicted RBP30.79■■■□□ 2.52
CMTM4-202ENST00000394106 APOLD1Q96LR9 279 aa30.79■■■□□ 2.52
CMTM4-202ENST00000394106 LRRC61Q9BV99 259 aa30.79■■■□□ 2.52
CMTM4-202ENST00000394106 DUSP23Q9BVJ7 150 aa30.79■■■□□ 2.52
CMTM4-202ENST00000394106 TDRD1Q9BXT4 1180 aaKnown RBP30.79■■■□□ 2.52
CMTM4-202ENST00000394106 IMPACTQ9P2X3 320 aa30.79■■■□□ 2.52
CMTM4-202ENST00000394106 SAE1Q9UBE0 346 aaPredicted RBP30.79■■■□□ 2.52
CMTM4-202ENST00000394106 PLXNB3Q9ULL4 1909 aa30.79■■■□□ 2.52
CMTM4-202ENST00000394106 SPEGQ15772 3267 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 A0A0U1RQS6 177 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 FAM149AA5PLN7 773 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 ZRANB2O95218 330 aaKnown RBP eCLIP30.78■■■□□ 2.52
CMTM4-202ENST00000394106 ACP1P24666 158 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 HNF1BP35680 557 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 ETV3P41162 512 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 CD86P42081 329 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 CLDN6P56747 220 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 SMAD1Q15797 465 aaKnown RBP30.78■■■□□ 2.52
CMTM4-202ENST00000394106 ALG11Q2TAA5 492 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 NYAP1Q6ZVC0 841 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 KIAA1328Q86T90 577 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 RCOR2Q8IZ40 523 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 CNTD1Q8N815 330 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 KRT35Q92764 455 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 WDR92Q96MX6 357 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 KLQ9UEF7 1012 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 PPIL1Q9Y3C6 166 aa30.78■■■□□ 2.52
CMTM4-202ENST00000394106 AKAP13Q12802 2813 aa30.77■■■□□ 2.52
CMTM4-202ENST00000394106 CACNB4O00305 520 aaPredicted RBP30.77■■■□□ 2.52
CMTM4-202ENST00000394106 GCATO75600 419 aa30.77■■■□□ 2.52
CMTM4-202ENST00000394106 CDK4P11802 303 aa30.77■■■□□ 2.52
CMTM4-202ENST00000394106 TCEA2Q15560 299 aa30.77■■■□□ 2.52
CMTM4-202ENST00000394106 TFDP3Q5H9I0 405 aa30.77■■■□□ 2.52
CMTM4-202ENST00000394106 ESRP1Q6NXG1 681 aaKnown RBP30.77■■■□□ 2.52
CMTM4-202ENST00000394106 PNCKQ6P2M8 343 aa30.77■■■□□ 2.52
CMTM4-202ENST00000394106 PELI3Q8N2H9 469 aa30.77■■■□□ 2.52
CMTM4-202ENST00000394106 LPCAT1Q8NF37 534 aa30.77■■■□□ 2.52
CMTM4-202ENST00000394106 ATL2Q8NHH9 583 aa30.77■■■□□ 2.52
CMTM4-202ENST00000394106 FUBP1Q96AE4 644 aaKnown RBP30.77■■■□□ 2.52
CMTM4-202ENST00000394106 AGAP3Q96P47 875 aa30.77■■■□□ 2.52
CMTM4-202ENST00000394106 LACRTQ9GZZ8 138 aa30.77■■■□□ 2.52
CMTM4-202ENST00000394106 BRD8Q9H0E9 1235 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms