RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 RXFP2Q8WXD0 754 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 NAP1L3Q99457 506 aaPredicted RBP18.8■□□□□ 0.6
SNCB-202ENST00000393693 LRRC61Q9BV99 259 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 CLPBQ9H078 707 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 MBNL1Q9NR56 388 aaKnown RBP18.8■□□□□ 0.6
SNCB-202ENST00000393693 NEU3Q9UQ49 428 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 FLNBO75369 2602 aaKnown RBP18.8■□□□□ 0.6
SNCB-202ENST00000393693 UQCRHLA0A096LP55 91 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 AREL1O15033 823 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 ZNF185O15231 689 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 PSTPIP1O43586 416 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 CEP104O60308 925 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 POP4O95707 220 aaKnown RBP18.79■□□□□ 0.6
SNCB-202ENST00000393693 UQCRHP07919 91 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 CELA2BP08218 269 aaPredicted RBP18.79■□□□□ 0.6
SNCB-202ENST00000393693 GPD1P21695 349 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 RFC1P35251 1148 aaPredicted RBP18.79■□□□□ 0.6
SNCB-202ENST00000393693 CETN2P41208 172 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 SSR1P43307 286 aaKnown RBP18.79■□□□□ 0.6
SNCB-202ENST00000393693 MAPKAPK2P49137 400 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 THOP1P52888 689 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 SNRPD1P62314 119 aaKnown RBP18.79■□□□□ 0.6
SNCB-202ENST00000393693 SKOR1P84550 965 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 VAC14Q08AM6 782 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 POLD3Q15054 466 aaPredicted RBP18.79■□□□□ 0.6
SNCB-202ENST00000393693 SEL1L2Q5TEA6 688 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 IGF2-ASQ6U949 168 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 ARCQ7LC44 396 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 TTC7BQ86TV6 843 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 ACTRT1Q8TDG2 376 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 TTC9Q92623 222 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 TRIM7Q9C029 511 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 TMEM248Q9NWD8 314 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 NCKIPSDQ9NZQ3 722 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 SSUH2Q9Y2M2 353 aa18.79■□□□□ 0.6
SNCB-202ENST00000393693 YY2O15391 372 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 RNF8O76064 485 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 LRIG2O94898 1065 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 ANXA6P08133 673 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 KRT10P13645 584 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 TSHRP16473 764 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 ETFBP38117 255 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 PDX1P52945 283 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 NRG1Q02297 640 aaPredicted RBP18.78■□□□□ 0.6
SNCB-202ENST00000393693 PTK2BQ14289 1009 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 TCEA2Q15560 299 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 HADHQ16836 314 aaKnown RBP18.78■□□□□ 0.6
SNCB-202ENST00000393693 ARL13BQ3SXY8 428 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 C6orf132Q5T0Z8 1188 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 FAXCQ5TGI0 409 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 KIAA1614Q5VZ46 1190 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 GDPD4Q6W3E5 623 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 ZNF572Q7Z3I7 529 aaPredicted RBP18.78■□□□□ 0.6
SNCB-202ENST00000393693 CCDC185Q8N715 623 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 UBXN4Q92575 508 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 WBP1Q96G27 269 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 CCDC3Q9BQI4 270 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 MAGEH1Q9H213 219 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 SYNDIG1Q9H7V2 258 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 HPCAL4Q9UM19 191 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 PCDHGA8Q9Y5G5 932 aa18.78■□□□□ 0.6
SNCB-202ENST00000393693 ASH1LQ9NR48 2969 aaKnown RBP18.78■□□□□ 0.6
SNCB-202ENST00000393693 CXorf51AA0A1B0GTR3 108 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 LMO7DNF2Z398 122 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 J3QKU1 62 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 PGRMC1O00264 195 aaKnown RBP18.77■□□□□ 0.6
SNCB-202ENST00000393693 CTIFO43310 598 aaKnown RBP18.77■□□□□ 0.6
SNCB-202ENST00000393693 KDELR3O43731 214 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 RAMP2O60895 175 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 TM7SF2O76062 418 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 SDC4P31431 198 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 ZNF143P52747 638 aaPredicted RBP18.77■□□□□ 0.6
SNCB-202ENST00000393693 GEMIN4P57678 1058 aaKnown RBP18.77■□□□□ 0.6
SNCB-202ENST00000393693 ODF2Q5BJF6 829 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 LRRC38Q5VT99 294 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 CCDC70Q6NSX1 233 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 ZNF354CQ86Y25 554 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 RASGEF1CQ8N431 466 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 TP53I13Q8NBR0 393 aaPredicted RBP18.77■□□□□ 0.6
SNCB-202ENST00000393693 CXorf40AQ8TE69 158 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 GRAMD1AQ96CP6 724 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 TBC1D31Q96DN5 1066 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 EPAS1Q99814 870 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 CNPY3Q9BT09 278 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 WRAP53Q9BUR4 548 aaKnown RBP18.77■□□□□ 0.6
SNCB-202ENST00000393693 OSBPL1AQ9BXW6 950 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 SLC13A1Q9BZW2 595 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 KLC2Q9H0B6 622 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 DDX56Q9NY93 547 aaKnown RBP18.77■□□□□ 0.6
SNCB-202ENST00000393693 GULP1Q9UBP9 304 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 TTC7AQ9ULT0 858 aaPredicted RBP18.77■□□□□ 0.6
SNCB-202ENST00000393693 PADI4Q9UM07 663 aa18.77■□□□□ 0.6
SNCB-202ENST00000393693 TENM4Q6N022 2769 aa18.76■□□□□ 0.59
SNCB-202ENST00000393693 C2CD4BA6NLJ0 364 aa18.76■□□□□ 0.59
SNCB-202ENST00000393693 CDRT15L2A8MXV6 281 aa18.76■□□□□ 0.59
SNCB-202ENST00000393693 PYCARD-AS1I3L0S3 204 aa18.76■□□□□ 0.59
SNCB-202ENST00000393693 TCEA3O75764 348 aa18.76■□□□□ 0.59
SNCB-202ENST00000393693 TMCC1O94876 653 aa18.76■□□□□ 0.59
SNCB-202ENST00000393693 TNFSF15O95150 251 aa18.76■□□□□ 0.59
SNCB-202ENST00000393693 TIMP2P16035 220 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms