RNA–Protein interactions for RNA: ENST00000393540.7

CCDC110-202, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC110, Length 2,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-202ENST00000393540 CBX4O00257 560 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 LEFTY2O00292 366 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CCL16O15467 120 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 GRID2O43424 1007 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 EFCAB14O75071 495 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 RFPL2O75678 378 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 LUC7L3O95232 432 aaKnown RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 NDST3O95803 873 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 C1RP00736 705 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 FGBP02675 491 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 JUNP05412 331 aaKnown RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CHRNGP07510 517 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 KITP10721 976 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 ARSAP15289 507 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 NQO1P15559 274 aaKnown RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 GM2AP17900 193 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 HDCP19113 662 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 GKP32189 559 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CD70P32970 193 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 BMP8BP34820 402 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 BMPR1AP36894 532 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 IDH3AP50213 366 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 SUOXP51687 545 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 AQP5P55064 265 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 RAB10P61026 200 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 ABCE1P61221 599 aaKnown RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 XIAPP98170 497 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 NSUN2Q08J23 767 aaKnown RBP eCLIP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 ZNF177Q13360 481 aaPredicted RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 PEX6Q13608 980 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 ITGA9Q13797 1035 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 USP10Q14694 798 aaKnown RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 RFTN1Q14699 578 aaPredicted RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 TYSND1Q2T9J0 566 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CCDC153Q494R4 210 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 DGKKQ5KSL6 1271 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 SPDYAQ5MJ70 313 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 ATXN7L2Q5T6C5 722 aaPredicted RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 VWA5B1Q5TIE3 1220 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 FYB2Q5VWT5 728 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 IL31Q6EBC2 164 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 ZNF783Q6ZMS7 281 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 RINLQ6ZS11 566 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 PTAR1Q7Z6K3 402 aaPredicted RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 HERC6Q8IVU3 1022 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 ARID3BQ8IVW6 561 aaPredicted RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 PIANPQ8IYJ0 282 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CARNMT1Q8N4J0 409 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 FIBCD1Q8N539 461 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 MRPL43Q8N983 215 aaKnown RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 TXNDC5Q8NBS9 432 aaKnown RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 KREMEN2Q8NCW0 462 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 BRSK1Q8TDC3 778 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 HERVK_113Q902F9 699 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 ZSWIM3Q96MP5 696 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 BIRC8Q96P09 236 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 SLC30A3Q99726 388 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 LBHD1Q9BQE6 289 aaPredicted RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 C17orf80Q9BSJ5 609 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 TRIM55Q9BYV6 548 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 PRKD2Q9BZL6 878 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 LRMDAQ9H2I8 198 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 NMRAL1Q9HBL8 299 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 NLE1Q9NVX2 485 aaPredicted RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 KCNK4Q9NYG8 393 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 ARMCX1Q9P291 453 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CFAP97Q9P2B7 532 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CPSF2Q9P2I0 782 aaKnown RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 SEPT3Q9UH03 358 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 RIMKLBQ9ULI2 386 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 RUVBL2Q9Y230 463 aaKnown RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 ANKRD6Q9Y2G4 727 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 DNAJC16Q9Y2G8 782 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 PCDHB12Q9Y5F1 795 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 NUP210Q8TEM1 1887 aaPredicted RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 WDFY3Q8IZQ1 3526 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 CACNA1BQ00975 2339 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 MUC22E2RYF6 1773 aaPredicted RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 FAM86C2PA6NEL3 165 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 NEMP2A6NFY4 417 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 H3BMM5 538 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 RFXAPO00287 272 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 FCHO1O14526 889 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 GRM6O15303 877 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 GPR39O43194 453 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 CLASP2O75122 1294 aaKnown RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 RPP40O75818 363 aaKnown RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 KLHL2O95198 593 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 FGF1P05230 155 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 C8AP07357 584 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 RALBP11234 206 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 HLA-DPA1P20036 260 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 SAT1P21673 171 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 FDXRP22570 491 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 IGFBP4P22692 258 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 HNRNPH1P31943 449 aaKnown RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 PPM1AP35813 382 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 HADHAP40939 763 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms