RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 C16orf46Q6P387 395 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 CNSTQ6PJW8 725 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 FAM47EQ6ZV65 393 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 Q6ZVU0 165 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 SDCCAG8Q86SQ7 713 aaPredicted RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 C12orf40Q86WS4 652 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 CILP2Q8IUL8 1156 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 YAF2Q8IY57 180 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 PCDH20Q8N6Y1 951 aaKnown RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 OR4L1Q8NH43 312 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 TTC8Q8TAM2 541 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 PIH1D2Q8WWB5 315 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 ISG20Q96AZ6 181 aaKnown RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 CABS1Q96KC9 395 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 TSNARE1Q96NA8 513 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 GPR22Q99680 433 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 CEP44Q9C0F1 390 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 ZNF576Q9H609 170 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 CATSPERZQ9NTU4 200 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 FGFR1OP2Q9NVK5 253 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 MKS1Q9NXB0 559 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 HACD3Q9P035 362 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 MARCH4Q9P2E8 410 aaPredicted RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 CDH7Q9ULB5 785 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 SLC8A2Q9UPR5 921 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 CXorf51AA0A1B0GTR3 108 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 A8MX80 341 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 TRAFD1O14545 582 aaPredicted RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 PHGDHO43175 533 aaKnown RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 HOXC11O43248 304 aaPredicted RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 FZD6O60353 706 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 SOCS5O75159 536 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 TULP3O75386 442 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 POP4O95707 220 aaKnown RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 ATP5BP06576 529 aaKnown RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 CISD3P0C7P0 127 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 SLC6A11P48066 632 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 LEPRP48357 1165 aaKnown RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 SERPINB4P48594 390 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 CCNHP51946 323 aaPredicted RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 PGGT1BP53609 377 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 RPL26P61254 145 aaKnown RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 ACVR1Q04771 509 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 ADAM15Q13444 863 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 GRM2Q14416 872 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 TAF1BQ53T94 588 aaPredicted RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 ZNF789Q5FWF6 425 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 GKAP1Q5VSY0 366 aaPredicted RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 FOXR1Q6PIV2 292 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 DPY19L3Q6ZPD9 716 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 LMNTD2Q8IXW0 634 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.66□□□□□ -1.02
TDP1-203ENST00000393454 KIAA1958Q8N8K9 716 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 ZNF75CPQ92670 426 aaPredicted RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 ELAC2Q9BQ52 826 aaKnown RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 MCMBPQ9BTE3 642 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 POLR3BQ9NW08 1133 aaPredicted RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 CLDND1Q9NY35 253 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 OBP2AQ9NY56 170 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 FKBPLQ9UIM3 349 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 RIMKLBQ9ULI2 386 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 RPL26L1Q9UNX3 145 aaKnown RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 PKP3Q9Y446 797 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 ZNF711Q9Y462 761 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 TTC34A8MYJ7 566 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 HTRA2O43464 458 aaPredicted RBP8.65□□□□□ -1.02
TDP1-203ENST00000393454 UGT2B4P06133 528 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 C2P06681 752 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 STMN1P16949 149 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 BGNP21810 368 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 ETV4P43268 484 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 MAGEA12P43365 314 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 ST8SIA6P61647 398 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 IRF9Q00978 393 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 KDSRQ06136 332 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 DMTNQ08495 405 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 PDGFRLQ15198 375 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 GRAMD4Q6IC98 578 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 AFTPHQ6ULP2 937 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 VITQ6UXI7 678 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 CHRDL2Q6WN34 429 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 KYAT3Q6YP21 454 aaKnown RBP8.65□□□□□ -1.02
TDP1-203ENST00000393454 LYSMD3Q7Z3D4 306 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 KIAA0907Q7Z7F0 614 aaPredicted RBP8.65□□□□□ -1.02
TDP1-203ENST00000393454 NUDCD3Q8IVD9 361 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 TTC30BQ8N4P2 665 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 CHST14Q8NCH0 376 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 GRIN3AQ8TCU5 1115 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 WFIKKN2Q8TEU8 576 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 ISL2Q96A47 359 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 MYADMQ96S97 322 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 NDNQ99608 321 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 KXD1Q9BQD3 176 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 PITPNM3Q9BZ71 974 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 SUV39H2Q9H5I1 410 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 MANSC1Q9H8J5 431 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 ECT2Q9H8V3 914 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 TRPV4Q9HBA0 871 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 MAGEE1Q9HCI5 957 aa8.65□□□□□ -1.02
TDP1-203ENST00000393454 ZNF358Q9NW07 568 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms