RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 SUPT7LO94864 414 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 S1PR4O95977 384 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 ALDOCP09972 364 aaKnown RBP18.9■□□□□ 0.62
CBX1-202ENST00000393408 SLC26A3P40879 764 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 CD86P42081 329 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 SLC7A2P52569 658 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 PURAQ00577 322 aaKnown RBP18.9■□□□□ 0.62
CBX1-202ENST00000393408 CYTH1Q15438 398 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 UGT3A2Q3SY77 523 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 UNC50Q53HI1 259 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 LDB1Q86U70 411 aaPredicted RBP18.9■□□□□ 0.62
CBX1-202ENST00000393408 C19orf60Q96EN9 201 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 C3orf30Q96M34 536 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 MFSD1Q9H3U5 465 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 TMCO1Q9UM00 188 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 MTF2Q9Y483 593 aaPredicted RBP18.9■□□□□ 0.62
CBX1-202ENST00000393408 CEPT1Q9Y6K0 416 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 MROH6A6NGR9 719 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 TNFRSF10BO14763 440 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 TMCC1O94876 653 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 GPX3P22352 226 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 ARSDP51689 593 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 MLLT6P55198 1093 aaPredicted RBP18.89■□□□□ 0.61
CBX1-202ENST00000393408 MAP2K5Q13163 448 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 IHHQ14623 411 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 DHFR2Q86XF0 187 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 SH3RF2Q8TEC5 729 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 ROPN1LQ96C74 230 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 CIB1Q99828 191 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 SLC39A3Q9BRY0 314 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 HAUS8Q9BT25 410 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 EFHD1Q9BUP0 239 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 NOL11Q9H8H0 719 aaKnown RBP18.89■□□□□ 0.61
CBX1-202ENST00000393408 NMUR1Q9HB89 426 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 SPON1Q9HCB6 807 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 VPS45Q9NRW7 570 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 FNIP2Q9P278 1114 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 H3BSA7 217 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 CCL22O00626 93 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 H6PDO95479 791 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 MMP2P08253 660 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 RENBPP51606 427 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 MAXP61244 160 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 NFKB2Q00653 900 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 C9orf131Q5VYM1 1079 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 PIM3Q86V86 326 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 RETREG3Q86VR2 466 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 MYO1HQ8N1T3 1032 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 PTPN18Q99952 460 aa18.89■□□□□ 0.61
CBX1-202ENST00000393408 MARCH4Q9P2E8 410 aaPredicted RBP18.89■□□□□ 0.61
CBX1-202ENST00000393408 GMPR2Q9P2T1 348 aaKnown RBP18.89■□□□□ 0.61
CBX1-202ENST00000393408 ZNF839A8K0R7 811 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 M0QZQ0 153 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 ZNF23P17027 643 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 CDH2P19022 906 aaPredicted RBP18.88■□□□□ 0.61
CBX1-202ENST00000393408 SLC5A2P31639 672 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 STX1BP61266 288 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 HERVK_113P63132 956 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 PIK3R6Q5UE93 754 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 MRPL10Q7Z7H8 261 aaKnown RBP18.88■□□□□ 0.61
CBX1-202ENST00000393408 ANKFN1Q8N957 763 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 OR6P1Q8NGX9 317 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 HASPINQ8TF76 798 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 HDAC10Q969S8 669 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 PTERQ96BW5 349 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 TMEM79Q9BSE2 394 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 ERVK-6Q9BXR3 956 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 DDX18Q9NVP1 670 aaKnown RBP18.88■□□□□ 0.61
CBX1-202ENST00000393408 HSFX1Q9UBD0 423 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 DOCK4Q8N1I0 1966 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 TTC3P53804 2025 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 H3BNH8 94 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 J3KR12 359 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 HTRA2O43464 458 aaPredicted RBP18.88■□□□□ 0.61
CBX1-202ENST00000393408 POMCP01189 267 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 HSPA8P11142 646 aaKnown RBP18.88■□□□□ 0.61
CBX1-202ENST00000393408 ATP6V1B2P21281 511 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 DSC2Q02487 901 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 ITKQ08881 620 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 SLC10A7Q0GE19 358 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 CCL14Q16627 93 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 FSCN1Q16658 493 aaKnown RBP18.88■□□□□ 0.61
CBX1-202ENST00000393408 LRRC23Q53EV4 343 aaPredicted RBP18.88■□□□□ 0.61
CBX1-202ENST00000393408 PITRM1Q5JRX3 1037 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 OVOS1Q6IE37 1185 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 UMODL1-AS1Q8N2C9 162 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 OR2T34Q8NGX1 318 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 OR2T3Q8NH03 318 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 FATE1Q969F0 183 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 C1orf74Q96LT6 269 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 KLHL5Q96PQ7 755 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 CCT7Q99832 543 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 GPATCH1Q9BRR8 931 aaKnown RBP18.88■□□□□ 0.61
CBX1-202ENST00000393408 AKTIPQ9H8T0 292 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 ARMC1Q9NVT9 282 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 POLR3BQ9NW08 1133 aaPredicted RBP18.88■□□□□ 0.61
CBX1-202ENST00000393408 THEGQ9P2T0 379 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 DSEQ9UL01 958 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 PHF24Q9UPV7 400 aa18.88■□□□□ 0.61
CBX1-202ENST00000393408 TDRD15B5MCY1 1934 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms