RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 VPS33AQ96AX1 596 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 HGH1Q9BTY7 390 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 PARVBQ9HBI1 364 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.12□□□□□ -1.11
ATXN3-203ENST00000393287 GDE1Q9NZC3 331 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 A0A1B0GUL6 1792 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 UBDO15205 165 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 CBSLP0DN79 551 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 SERPINB1P30740 379 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 CBSP35520 551 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 PGM1P36871 562 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 DUSP3P51452 185 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-203ENST00000393287 ZNF132P52740 706 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 DUPD1Q68J44 220 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 OSTM1Q86WC4 334 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 CLP1Q92989 425 aaKnown RBP8.12□□□□□ -1.11
ATXN3-203ENST00000393287 USP7Q93009 1102 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 ELMO3Q96BJ8 720 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 ZNF641Q96N77 438 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-203ENST00000393287 ECSITQ9BQ95 431 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 C3orf14Q9HBI5 128 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 NDRG2Q9UN36 371 aaKnown RBP8.12□□□□□ -1.11
ATXN3-203ENST00000393287 PRMT5O14744 637 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-203ENST00000393287 CCND1P24385 295 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 PTGER3P43115 390 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 UBXN11Q5T124 520 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 TAS1R3Q7RTX0 852 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 GKN2Q86XP6 184 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 CENPLQ8N0S6 344 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-203ENST00000393287 TMEM132CQ8N3T6 1108 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 CENPTQ96BT3 561 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 RHOJQ9H4E5 214 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 ACSS3Q9H6R3 686 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 ADGRE2Q9UHX3 823 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 SNX5Q9Y5X3 404 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 TNFP01375 233 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 ANXA6P08133 673 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 RRM2P31350 389 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 GPR15P49685 360 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 GALNT3Q14435 633 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 PAFAH1B3Q15102 231 aaKnown RBP8.12□□□□□ -1.11
ATXN3-203ENST00000393287 CCDC33Q8N5R6 958 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 SLC22A18Q96BI1 424 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 CASD1Q96PB1 797 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 ACOX2Q99424 681 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 SPATA5L1Q9BVQ7 753 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 SPATS2LQ9NUQ6 558 aaKnown RBP8.12□□□□□ -1.11
ATXN3-203ENST00000393287 ABCB8Q9NUT2 735 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 SYBUQ9NX95 663 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 MRPL42Q9Y6G3 142 aaKnown RBP8.12□□□□□ -1.11
ATXN3-203ENST00000393287 BAZ2AQ9UIF9 1905 aaKnown RBP8.12□□□□□ -1.11
ATXN3-203ENST00000393287 SLC7A4O43246 635 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 VIPP01282 170 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 ESR1P03372 595 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 NUDT17P0C025 328 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 GATMP50440 423 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 RPP38P78345 283 aaKnown RBP8.12□□□□□ -1.11
ATXN3-203ENST00000393287 DAB2P98082 770 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 MMRN1Q13201 1228 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 ANXA8L1Q5VT79 327 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 HDDC3Q8N4P3 179 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 ZSCAN18Q8TBC5 510 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-203ENST00000393287 AUTS2Q8WXX7 1259 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 ZBTB9Q96C00 473 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 P2RY13Q9BPV8 354 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 AIF1LQ9BQI0 150 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 CCM2Q9BSQ5 444 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 STRA6Q9BX79 667 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 DNAJB4Q9UDY4 337 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 EVLQ9UI08 416 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-203ENST00000393287 ANKRD31Q8N7Z5 1873 aa8.12□□□□□ -1.11
ATXN3-203ENST00000393287 JAK1P23458 1154 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 GRIA2P42262 883 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 RASA2Q15283 850 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 KLHDC10Q6PID8 442 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 SNX20Q7Z614 316 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 KBTBD6Q86V97 674 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 FAM174AQ8TBP5 190 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 PSMG2Q969U7 264 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 AP2M1Q96CW1 435 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 CEP41Q9BYV8 373 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 SSU72Q9NP77 194 aaKnown RBP8.11□□□□□ -1.11
ATXN3-203ENST00000393287 KCNE2Q9Y6J6 123 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 LRRC37AA6NMS7 1700 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 DOCK1Q14185 1865 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 C16orf96A6NNT2 1141 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 YJEFN3A6XGL0 299 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 E7ENQ6 273 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 FGFR3P22607 806 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 PPIBP23284 216 aaKnown RBP8.11□□□□□ -1.11
ATXN3-203ENST00000393287 CRELD2Q6UXH1 353 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-203ENST00000393287 PRELID2Q8N945 189 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 LGMNQ99538 433 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 UGT2B4P06133 528 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 ENO1P06733 434 aaKnown RBP8.11□□□□□ -1.11
ATXN3-203ENST00000393287 PIM1P11309 404 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-203ENST00000393287 RABGGTBP53611 331 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 DEFB103AP81534 67 aa8.11□□□□□ -1.11
ATXN3-203ENST00000393287 SMAD1Q15797 465 aaKnown RBP8.11□□□□□ -1.11
ATXN3-203ENST00000393287 SNX30Q5VWJ9 437 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms