RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 IKBKEQ14164 716 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 SH2D4BQ5SQS7 431 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 SPOUT1Q5T280 376 aaKnown RBP25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 C1orf146Q5VVC0 180 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 TPGS2Q68CL5 300 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 C16orf59Q7L2K0 433 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 ANKRD27Q96NW4 1050 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 LENG8Q96PV6 779 aaPredicted RBP25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 STX18Q9P2W9 335 aaKnown RBP25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 CBX4O00257 560 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 INSIG1O15503 277 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 FDXRP22570 491 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 SLC34A1Q06495 639 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 RFTN1Q14699 578 aaPredicted RBP25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 CYTH1Q15438 398 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 TRIM60Q495X7 471 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 SETD3Q86TU7 594 aaPredicted RBP25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 OR4L1Q8NH43 312 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 CCDC28BQ9BUN5 200 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 CATSPERZQ9NTU4 200 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 G3BP2Q9UN86 482 aaKnown RBP25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 LRRC42Q9Y546 428 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 SNUPNO95149 360 aaKnown RBP25.65■■□□□ 1.7
SMARCD3-203ENST00000392811 CD1EP15812 388 aa25.65■■□□□ 1.7
SMARCD3-203ENST00000392811 PIK3R1P27986 724 aa25.65■■□□□ 1.7
SMARCD3-203ENST00000392811 GCKP35557 465 aa25.65■■□□□ 1.7
SMARCD3-203ENST00000392811 SLC26A3P40879 764 aa25.65■■□□□ 1.7
SMARCD3-203ENST00000392811 PLK1P53350 603 aa25.65■■□□□ 1.7
SMARCD3-203ENST00000392811 DSG1Q02413 1049 aa25.65■■□□□ 1.7
SMARCD3-203ENST00000392811 TAF11Q15544 211 aa25.65■■□□□ 1.7
SMARCD3-203ENST00000392811 GIMAP7Q8NHV1 300 aa25.65■■□□□ 1.7
SMARCD3-203ENST00000392811 TRMT2BQ96GJ1 504 aaKnown RBP25.65■■□□□ 1.7
SMARCD3-203ENST00000392811 RNF208Q9H0X6 261 aa25.65■■□□□ 1.7
SMARCD3-203ENST00000392811 SCUBE2Q9NQ36 999 aa25.65■■□□□ 1.7
SMARCD3-203ENST00000392811 GTSE1Q9NYZ3 720 aa25.65■■□□□ 1.7
SMARCD3-203ENST00000392811 TBC1D30Q9Y2I9 924 aa25.65■■□□□ 1.7
SMARCD3-203ENST00000392811 TIAL1Q01085 375 aaKnown RBP eCLIP25.64■■□□□ 1.7
SMARCD3-203ENST00000392811 RNF219Q5W0B1 726 aaPredicted RBP25.64■■□□□ 1.7
SMARCD3-203ENST00000392811 ACTRT2Q8TDY3 377 aa25.64■■□□□ 1.7
SMARCD3-203ENST00000392811 RMDN1Q96DB5 314 aa25.64■■□□□ 1.7
SMARCD3-203ENST00000392811 CDKN2AIPNLQ96HQ2 116 aa25.64■■□□□ 1.7
SMARCD3-203ENST00000392811 ZNF385DQ9H6B1 395 aa25.64■■□□□ 1.7
SMARCD3-203ENST00000392811 ALG9Q9H6U8 611 aa25.64■■□□□ 1.7
SMARCD3-203ENST00000392811 ARHGAP26Q9UNA1 814 aa25.64■■□□□ 1.7
SMARCD3-203ENST00000392811 CRTAMO95727 393 aa25.64■■□□□ 1.69
SMARCD3-203ENST00000392811 OGNP20774 298 aaKnown RBP25.64■■□□□ 1.69
SMARCD3-203ENST00000392811 ZNF140P52738 457 aaPredicted RBP25.64■■□□□ 1.69
SMARCD3-203ENST00000392811 TMEM198Q66K66 360 aa25.64■■□□□ 1.69
SMARCD3-203ENST00000392811 NXNQ6DKJ4 435 aa25.64■■□□□ 1.69
SMARCD3-203ENST00000392811 CXorf57Q6NSI4 855 aaKnown RBP25.64■■□□□ 1.69
SMARCD3-203ENST00000392811 CNKSR3Q6P9H4 555 aa25.64■■□□□ 1.69
SMARCD3-203ENST00000392811 ISCA2Q86U28 154 aa25.64■■□□□ 1.69
SMARCD3-203ENST00000392811 CPSF7Q8N684 471 aaKnown RBP25.64■■□□□ 1.69
SMARCD3-203ENST00000392811 NRG4Q8WWG1 115 aa25.64■■□□□ 1.69
SMARCD3-203ENST00000392811 VWCEQ96DN2 955 aa25.64■■□□□ 1.69
SMARCD3-203ENST00000392811 RTKNQ9BST9 563 aa25.64■■□□□ 1.69
SMARCD3-203ENST00000392811 NLE1Q9NVX2 485 aaPredicted RBP25.64■■□□□ 1.69
SMARCD3-203ENST00000392811 SMPD4Q9NXE4 827 aa25.64■■□□□ 1.69
SMARCD3-203ENST00000392811 CORO1CQ9ULV4 474 aaPredicted RBP25.64■■□□□ 1.69
SMARCD3-203ENST00000392811 PRLP01236 227 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 PRSS56P0CW18 603 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 CCL5P13501 91 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 KCNC1P48547 511 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 ERFP50548 548 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 SULT2A1Q06520 285 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 ILF2Q12905 390 aaKnown RBP25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 PGM2L1Q6PCE3 622 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 RPS27LQ71UM5 84 aaKnown RBP25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 TMCO2Q7Z6W1 182 aaPredicted RBP25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 MYLK4Q86YV6 388 aaPredicted RBP25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 DEFB107AQ8IZN7 70 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 PHF21BQ96EK2 531 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 CATSPER2Q96P56 530 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 TDRD1Q9BXT4 1180 aaKnown RBP25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 MUC3BQ9H195 1237 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 WASF2Q9Y6W5 498 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 CCNT2O60583 730 aaKnown RBP25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 PPARGP37231 505 aaPredicted RBP25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 STC1P52823 247 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 EPHB1P54762 984 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 BTKQ06187 659 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 VEPH1Q14D04 833 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 SDCCAG8Q86SQ7 713 aaPredicted RBP25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 SLC22A9Q8IVM8 553 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 SLC39A11Q8N1S5 342 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 TMEM169Q96HH4 297 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 SMIM14Q96QK8 99 aa25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 ARIH1Q9Y4X5 557 aaPredicted RBP25.63■■□□□ 1.69
SMARCD3-203ENST00000392811 ANAPC1Q9H1A4 1944 aa25.62■■□□□ 1.69
SMARCD3-203ENST00000392811 THRAP10827 490 aa25.62■■□□□ 1.69
SMARCD3-203ENST00000392811 SP100P23497 879 aaPredicted RBP25.62■■□□□ 1.69
SMARCD3-203ENST00000392811 VHLP40337 213 aa25.62■■□□□ 1.69
SMARCD3-203ENST00000392811 TWF1Q12792 350 aa25.62■■□□□ 1.69
SMARCD3-203ENST00000392811 TYSND1Q2T9J0 566 aa25.62■■□□□ 1.69
SMARCD3-203ENST00000392811 GLT6D1Q7Z4J2 308 aa25.62■■□□□ 1.69
SMARCD3-203ENST00000392811 SNX32Q86XE0 403 aa25.62■■□□□ 1.69
SMARCD3-203ENST00000392811 MDGA1Q8NFP4 955 aa25.62■■□□□ 1.69
SMARCD3-203ENST00000392811 N4BP2L2Q92802 583 aaPredicted RBP25.62■■□□□ 1.69
SMARCD3-203ENST00000392811 PTERQ96BW5 349 aa25.62■■□□□ 1.69
SMARCD3-203ENST00000392811 ZNF558Q96NG5 402 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms