RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 CCL4L1Q8NHW4 92 aa16.64■□□□□ 0.25
PTPRK-208ENST00000392449 NAT6Q93015 286 aa16.64■□□□□ 0.25
PTPRK-208ENST00000392449 SUDS3Q9H7L9 328 aaPredicted RBP16.64■□□□□ 0.25
PTPRK-208ENST00000392449 NOD2Q9HC29 1040 aa16.64■□□□□ 0.25
PTPRK-208ENST00000392449 CPNE5Q9HCH3 593 aa16.64■□□□□ 0.25
PTPRK-208ENST00000392449 PCDH18Q9HCL0 1135 aa16.64■□□□□ 0.25
PTPRK-208ENST00000392449 ANAPC7Q9UJX3 599 aa16.64■□□□□ 0.25
PTPRK-208ENST00000392449 A0A087X0T9 212 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 AGRPO00253 132 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 CD48P09326 243 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 ALPIP09923 528 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 FAM228BP0C875 321 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 CR2P20023 1033 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 TRAF2Q12933 501 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 SPIDRQ14159 915 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 CNGA3Q16281 694 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 SDR16C5Q8N3Y7 309 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 LZTR1Q8N653 840 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 OR56A4Q8NGH8 313 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 SMIM14Q96QK8 99 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 UBL7Q96S82 380 aaPredicted RBP16.63■□□□□ 0.25
PTPRK-208ENST00000392449 RBM15Q96T37 977 aaKnown RBP eCLIP16.63■□□□□ 0.251e-15■□□□□ 9.9
PTPRK-208ENST00000392449 NUP85Q9BW27 656 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 FOXP3Q9BZS1 431 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 TMEM168Q9H0V1 697 aa16.63■□□□□ 0.25
PTPRK-208ENST00000392449 CACNB4O00305 520 aaPredicted RBP16.62■□□□□ 0.25
PTPRK-208ENST00000392449 TCEA3O75764 348 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 TNFP01375 233 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 LHCGRP22888 699 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 GJC1P36383 396 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 ZNF135P52742 658 aaPredicted RBP16.62■□□□□ 0.25
PTPRK-208ENST00000392449 KIAA1024LP59773 190 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 CCL7P80098 99 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 BOLA3Q53S33 107 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 GKN2Q86XP6 184 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 LSMEM2Q8N112 164 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 ATPAF2Q8N5M1 289 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 TPCN2Q8NHX9 752 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 LRRN4Q8WUT4 740 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 PTCD2Q8WV60 388 aaKnown RBP16.62■□□□□ 0.25
PTPRK-208ENST00000392449 SCG3Q8WXD2 468 aaKnown RBP16.62■□□□□ 0.25
PTPRK-208ENST00000392449 COQ10AQ96MF6 247 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 ZNF599Q96NL3 588 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 SLC46A1Q96NT5 459 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 NUDCD1Q96RS6 583 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 CYP4F12Q9HCS2 524 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 MOSPD1Q9UJG1 213 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 DGKBQ9Y6T7 804 aa16.62■□□□□ 0.25
PTPRK-208ENST00000392449 A0A1W2PQJ5 194 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 A0A1W2PQM1 296 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 CFAP69A5D8W1 941 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 EIF4E1BA6NMX2 242 aaKnown RBP16.61■□□□□ 0.25
PTPRK-208ENST00000392449 B4DGG1 531 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 NTN3O00634 580 aaPredicted RBP16.61■□□□□ 0.25
PTPRK-208ENST00000392449 KLK10O43240 276 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 HTRA2O43464 458 aaPredicted RBP16.61■□□□□ 0.25
PTPRK-208ENST00000392449 MAP3K6O95382 1288 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 CPP00450 1065 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 RPLP0P05388 317 aaKnown RBP16.61■□□□□ 0.25
PTPRK-208ENST00000392449 SSR1P43307 286 aaKnown RBP16.61■□□□□ 0.25
PTPRK-208ENST00000392449 RENBPP51606 427 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 UBASH3AP57075 661 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 ERVPABLB-1P60509 514 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 POLR2LP62875 67 aaKnown RBP16.61■□□□□ 0.25
PTPRK-208ENST00000392449 PIGHQ14442 188 aaPredicted RBP16.61■□□□□ 0.25
PTPRK-208ENST00000392449 NFKBIBQ15653 356 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 ATP13A4Q4VNC1 1196 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 PNCKQ6P2M8 343 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 LVRNQ6Q4G3 990 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 HSD11B1LQ7Z5J1 315 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 TAF8Q7Z7C8 310 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 TSPAN33Q86UF1 283 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.61■□□□□ 0.25
PTPRK-208ENST00000392449 Q8N9G6 341 aaPredicted RBP16.61■□□□□ 0.25
PTPRK-208ENST00000392449 KCNE4Q8WWG9 221 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 NUS1Q96E22 293 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 MGME1Q9BQP7 344 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 WDR26Q9H7D7 661 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 THSD1Q9NS62 852 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 GCN1Q92616 2671 aaKnown RBP16.61■□□□□ 0.25
PTPRK-208ENST00000392449 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.61■□□□□ 0.25
PTPRK-208ENST00000392449 NPIPB15A6NHN6 443 aaPredicted RBP16.61■□□□□ 0.25
PTPRK-208ENST00000392449 MFSD11O43934 449 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 C1QL1O75973 258 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 FUCA1P04066 466 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 GYPCP04921 128 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 SERPING1P05155 500 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 CYP1A2P05177 515 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 CTPS1P17812 591 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 IL4RP24394 825 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 RBMS1P29558 406 aaKnown RBP16.61■□□□□ 0.25
PTPRK-208ENST00000392449 TRIM23P36406 574 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 ETV3P41162 512 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 MMP13P45452 471 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 CDH6P55285 790 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 KRT81Q14533 505 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 PCSK4Q6UW60 755 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 RFLNAQ6ZTI6 216 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 GPR155Q7Z3F1 870 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 NIPA2Q8N8Q9 360 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms