RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 TBKBP1A7MCY6 615 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 VPS26AO75436 327 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 BCAS2O75934 225 aaPredicted RBP14.29□□□□□ -0.12
RTF1-201ENST00000389629 CPSF4O95639 269 aaKnown RBP14.29□□□□□ -0.12
RTF1-201ENST00000389629 ALDOAP04075 364 aaKnown RBP14.29□□□□□ -0.12
RTF1-201ENST00000389629 ADSLP30566 484 aaPredicted RBP14.29□□□□□ -0.12
RTF1-201ENST00000389629 HALP42357 657 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 TWF1Q12792 350 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 SLC26A9Q7LBE3 791 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 B3GALNT2Q8NCR0 500 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 OR9I1Q8NGQ6 314 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 TPD52L3Q96J77 140 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 RPRD1AQ96P16 312 aaPredicted RBP14.29□□□□□ -0.12
RTF1-201ENST00000389629 SMAD5Q99717 465 aaKnown RBP14.29□□□□□ -0.12
RTF1-201ENST00000389629 HOPXQ9BPY8 73 aaPredicted RBP14.29□□□□□ -0.12
RTF1-201ENST00000389629 TBCCD1Q9NVR7 557 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 MFHAS1Q9Y4C4 1052 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 A0A1B0GUL6 1792 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 RRN3P2A6NIE6 340 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 G3V2T6 193 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 AZIN1O14977 448 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 LGALS2P05162 132 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 ZNF132P52740 706 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 LIPEQ05469 1076 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 FOXB2Q5VYV0 432 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 GLYATQ6IB77 296 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 DENND6AQ8IWF6 608 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 PLD6Q8N2A8 252 aaKnown RBP14.29□□□□□ -0.12
RTF1-201ENST00000389629 PRDM16Q9HAZ2 1276 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 GBA2Q9HCG7 927 aaPredicted RBP14.29□□□□□ -0.12
RTF1-201ENST00000389629 IFT80Q9P2H3 777 aaPredicted RBP14.29□□□□□ -0.12
RTF1-201ENST00000389629 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.29□□□□□ -0.12
RTF1-201ENST00000389629 USP54Q70EL1 1684 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 HTRA2O43464 458 aaPredicted RBP14.29□□□□□ -0.12
RTF1-201ENST00000389629 PTPN9P43378 593 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 ECT2LQ008S8 904 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 NRG1Q02297 640 aaPredicted RBP14.29□□□□□ -0.12
RTF1-201ENST00000389629 PRKCQQ04759 706 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 CEACAM7Q14002 265 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 NDUFA5Q16718 116 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 CTC1Q2NKJ3 1217 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 TEX44Q53QW1 395 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 FLCNQ8NFG4 579 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 RAB2BQ8WUD1 216 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 FAR1Q8WVX9 515 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 SOX17Q9H6I2 414 aaPredicted RBP14.29□□□□□ -0.12
RTF1-201ENST00000389629 RASSF1Q9NS23 344 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 UBR2Q8IWV8 1755 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 THRBP10828 461 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 ADRA1BP35368 520 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 TOP3AQ13472 1001 aaPredicted RBP14.29□□□□□ -0.12
RTF1-201ENST00000389629 OGFRL1Q5TC84 451 aaPredicted RBP14.29□□□□□ -0.12
RTF1-201ENST00000389629 DCBLD1Q8N8Z6 715 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 C19orf60Q96EN9 201 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 TRIM54Q9BYV2 358 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 KIF13AQ9H1H9 1805 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 H0Y858 1186 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 HDCP19113 662 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 MSH3P20585 1137 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 EPS8Q12929 822 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 TGFBIQ15582 683 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 DPYSL2Q16555 572 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 UGT2A3Q6UWM9 527 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 CDYL2Q8N8U2 506 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 ANKLE1Q8NAG6 615 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 SPATA22Q8NHS9 363 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 RPRD1BQ9NQG5 326 aaKnown RBP14.28□□□□□ -0.12
RTF1-201ENST00000389629 OXSMQ9NWU1 459 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 ABI2Q9NYB9 513 aaPredicted RBP14.28□□□□□ -0.12
RTF1-201ENST00000389629 TBX1O43435 398 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 ZBTB14O43829 449 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 IPO13O94829 963 aaKnown RBP14.28□□□□□ -0.12
RTF1-201ENST00000389629 FTH1P02794 183 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 SLC2A3P11169 496 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 MTHFRP42898 656 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 RHDQ02161 417 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 TRIM32Q13049 653 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 TIFABQ6ZNK6 161 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 MARCH7Q9H992 704 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 SLC13A4Q9UKG4 626 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 TIMM22Q9Y584 194 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 STYXL1Q9Y6J8 313 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 STX7O15400 261 aaKnown RBP14.28□□□□□ -0.12
RTF1-201ENST00000389629 ITGB6P18564 788 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 FMO4P31512 558 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 SLC10A6Q3KNW5 377 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 PLPPR4Q7Z2D5 763 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 SPPL2AQ8TCT8 520 aa14.28□□□□□ -0.12
RTF1-201ENST00000389629 EFCAB10A6NFE3 127 aa14.27□□□□□ -0.12
RTF1-201ENST00000389629 CASTOR2A6NHX0 329 aa14.27□□□□□ -0.12
RTF1-201ENST00000389629 DENRO43583 198 aaKnown RBP14.27□□□□□ -0.12
RTF1-201ENST00000389629 PORP16435 677 aaPredicted RBP14.27□□□□□ -0.12
RTF1-201ENST00000389629 PTPN3P26045 913 aa14.27□□□□□ -0.12
RTF1-201ENST00000389629 SERPINH1P50454 418 aaKnown RBP14.27□□□□□ -0.12
RTF1-201ENST00000389629 PPP1R8Q12972 351 aaKnown RBP14.27□□□□□ -0.12
RTF1-201ENST00000389629 PDZK1Q5T2W1 519 aa14.27□□□□□ -0.12
RTF1-201ENST00000389629 B3GNT9Q6UX72 402 aa14.27□□□□□ -0.12
RTF1-201ENST00000389629 LDB1Q86U70 411 aaPredicted RBP14.27□□□□□ -0.12
RTF1-201ENST00000389629 TMEM245Q9H330 911 aa14.27□□□□□ -0.12
RTF1-201ENST00000389629 NCBP2-AS2Q69YL0 99 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms