RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP26.5■■□□□ 1.83
NPHP3-202ENST00000383282 A0A1W2PQ67 120 aa26.5■■□□□ 1.83
NPHP3-202ENST00000383282 TMEM202A6NGA9 273 aa26.5■■□□□ 1.83
NPHP3-202ENST00000383282 K7ENP7 123 aa26.5■■□□□ 1.83
NPHP3-202ENST00000383282 PDE2AO00408 941 aaPredicted RBP26.5■■□□□ 1.83
NPHP3-202ENST00000383282 TRAFD1O14545 582 aaPredicted RBP26.5■■□□□ 1.83
NPHP3-202ENST00000383282 GLB1P16278 677 aa26.5■■□□□ 1.83
NPHP3-202ENST00000383282 NFKBIAP25963 317 aa26.5■■□□□ 1.83
NPHP3-202ENST00000383282 TYRO3Q06418 890 aa26.5■■□□□ 1.83
NPHP3-202ENST00000383282 ZNF235Q14590 738 aa26.5■■□□□ 1.83
NPHP3-202ENST00000383282 ACOX1Q15067 660 aa26.5■■□□□ 1.83
NPHP3-202ENST00000383282 ZSCAN23Q3MJ62 389 aa26.5■■□□□ 1.83
NPHP3-202ENST00000383282 INO80CQ6PI98 192 aaPredicted RBP26.5■■□□□ 1.83
NPHP3-202ENST00000383282 NYAP1Q6ZVC0 841 aa26.5■■□□□ 1.83
NPHP3-202ENST00000383282 B3GNT8Q7Z7M8 397 aa26.5■■□□□ 1.83
NPHP3-202ENST00000383282 TRIM11Q96F44 468 aa26.5■■□□□ 1.83
NPHP3-202ENST00000383282 FGF22Q9HCT0 170 aa26.5■■□□□ 1.83
NPHP3-202ENST00000383282 MRPL47Q9HD33 250 aaKnown RBP26.5■■□□□ 1.83
NPHP3-202ENST00000383282 WDR70Q9NW82 654 aa26.5■■□□□ 1.83
NPHP3-202ENST00000383282 CWC15Q9P013 229 aaKnown RBP26.5■■□□□ 1.83
NPHP3-202ENST00000383282 A0A1W2PQM1 296 aa26.49■■□□□ 1.83
NPHP3-202ENST00000383282 H3BRJ5 948 aa26.49■■□□□ 1.83
NPHP3-202ENST00000383282 LRCH4O75427 683 aa26.49■■□□□ 1.83
NPHP3-202ENST00000383282 CCKBRP32239 447 aa26.49■■□□□ 1.83
NPHP3-202ENST00000383282 TRIM23P36406 574 aa26.49■■□□□ 1.83
NPHP3-202ENST00000383282 ARL4AP40617 200 aa26.49■■□□□ 1.83
NPHP3-202ENST00000383282 TSR1Q2NL82 804 aaKnown RBP26.49■■□□□ 1.83
NPHP3-202ENST00000383282 OGFOD3Q6PK18 319 aa26.49■■□□□ 1.83
NPHP3-202ENST00000383282 CYP4V2Q6ZWL3 525 aaPredicted RBP26.49■■□□□ 1.83
NPHP3-202ENST00000383282 CCNJLQ8IV13 435 aa26.49■■□□□ 1.83
NPHP3-202ENST00000383282 BBS5Q8N3I7 341 aa26.49■■□□□ 1.83
NPHP3-202ENST00000383282 FOXP3Q9BZS1 431 aa26.49■■□□□ 1.83
NPHP3-202ENST00000383282 TRIM7Q9C029 511 aa26.49■■□□□ 1.83
NPHP3-202ENST00000383282 MRPL40Q9NQ50 206 aaKnown RBP26.49■■□□□ 1.83
NPHP3-202ENST00000383282 AIPL1Q9NZN9 384 aa26.49■■□□□ 1.83
NPHP3-202ENST00000383282 APPL1Q9UKG1 709 aa26.49■■□□□ 1.83
NPHP3-202ENST00000383282 PCDHGA7Q9Y5G6 932 aa26.49■■□□□ 1.83
NPHP3-202ENST00000383282 MGAQ8IWI9 3026 aa26.49■■□□□ 1.83
NPHP3-202ENST00000383282 A8MX80 341 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 JMJD7P0C870 316 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 MYBL1P10243 752 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 UGT1A5P35504 534 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 HSPA9P38646 679 aaKnown RBP26.48■■□□□ 1.83
NPHP3-202ENST00000383282 KLHL30Q0D2K2 578 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 CLN3Q13286 438 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 DPYSQ14117 519 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 KCTD16Q68DU8 428 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 PNCKQ6P2M8 343 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 ZNF571Q7Z3V5 609 aaPredicted RBP26.48■■□□□ 1.83
NPHP3-202ENST00000383282 JAMLQ86YT9 394 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 Q8N9G6 341 aaPredicted RBP26.48■■□□□ 1.83
NPHP3-202ENST00000383282 DPEP2Q9H4A9 486 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 CYP4F12Q9HCS2 524 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 KCTD5Q9NXV2 234 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 B4GALT6Q9UBX8 382 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 KALRNO60229 2985 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 LRRK1Q38SD2 2015 aa26.48■■□□□ 1.83
NPHP3-202ENST00000383282 GCN1Q92616 2671 aaKnown RBP26.47■■□□□ 1.83
NPHP3-202ENST00000383282 SMTNL1A8MU46 457 aa26.47■■□□□ 1.83
NPHP3-202ENST00000383282 B4DGG1 531 aa26.47■■□□□ 1.83
NPHP3-202ENST00000383282 PLA2G2AP14555 144 aa26.47■■□□□ 1.83
NPHP3-202ENST00000383282 PNLIPP16233 465 aa26.47■■□□□ 1.83
NPHP3-202ENST00000383282 PCK1P35558 622 aa26.47■■□□□ 1.83
NPHP3-202ENST00000383282 PRKCIP41743 596 aa26.47■■□□□ 1.83
NPHP3-202ENST00000383282 SLC10A7Q0GE19 358 aa26.47■■□□□ 1.83
NPHP3-202ENST00000383282 ARHGEF7Q14155 803 aa26.47■■□□□ 1.83
NPHP3-202ENST00000383282 C14orf28Q4W4Y0 310 aa26.47■■□□□ 1.83
NPHP3-202ENST00000383282 CERCAMQ5T4B2 595 aa26.47■■□□□ 1.83
NPHP3-202ENST00000383282 KIAA1524Q8TCG1 905 aa26.47■■□□□ 1.83
NPHP3-202ENST00000383282 PDCD6IPQ8WUM4 868 aaKnown RBP26.47■■□□□ 1.83
NPHP3-202ENST00000383282 TTC9Q92623 222 aa26.47■■□□□ 1.83
NPHP3-202ENST00000383282 NUS1Q96E22 293 aa26.47■■□□□ 1.83
NPHP3-202ENST00000383282 CCNL2Q96S94 520 aaPredicted RBP26.47■■□□□ 1.83
NPHP3-202ENST00000383282 TMEM168Q9H0V1 697 aa26.47■■□□□ 1.83
NPHP3-202ENST00000383282 MYO1AQ9UBC5 1043 aa26.47■■□□□ 1.83
NPHP3-202ENST00000383282 SOCS5O75159 536 aa26.46■■□□□ 1.83
NPHP3-202ENST00000383282 SLC5A2P31639 672 aa26.46■■□□□ 1.83
NPHP3-202ENST00000383282 ANO6Q4KMQ2 910 aa26.46■■□□□ 1.83
NPHP3-202ENST00000383282 TMCO3Q6UWJ1 677 aa26.46■■□□□ 1.83
NPHP3-202ENST00000383282 NSMCE1Q8WV22 266 aa26.46■■□□□ 1.83
NPHP3-202ENST00000383282 SPOCK2Q92563 424 aa26.46■■□□□ 1.83
NPHP3-202ENST00000383282 TMEM159Q96B96 161 aa26.46■■□□□ 1.83
NPHP3-202ENST00000383282 PHPT1Q9NRX4 125 aaPredicted RBP26.46■■□□□ 1.83
NPHP3-202ENST00000383282 LRIT1Q9P2V4 623 aa26.46■■□□□ 1.83
NPHP3-202ENST00000383282 A0A1W2PQC6 194 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 SYCE3A1L190 88 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 PRSS38A1L453 326 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 DDX3XO00571 662 aaKnown RBP eCLIP26.45■■□□□ 1.82
NPHP3-202ENST00000383282 HTRA2O43464 458 aaPredicted RBP26.45■■□□□ 1.82
NPHP3-202ENST00000383282 NOBOXO60393 691 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 CPP00450 1065 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 CYP2A6P11509 494 aaPredicted RBP26.45■■□□□ 1.82
NPHP3-202ENST00000383282 MYCLP1P12525 358 aaPredicted RBP26.45■■□□□ 1.82
NPHP3-202ENST00000383282 GM2AP17900 193 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 DPYSL2Q16555 572 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 BOLA3Q53S33 107 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 SPECC1LQ69YQ0 1117 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 TP53INP2Q8IXH6 220 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 COQ10AQ96MF6 247 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 NUDCD1Q96RS6 583 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms