RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 ELMOD3Q96FG2 381 aa4.41□□□□□ -1.7
SNAPC3-201ENST00000380799 PGAP3Q96FM1 320 aaPredicted RBP4.41□□□□□ -1.7
SNAPC3-201ENST00000380799 SPATA17Q96L03 361 aa4.41□□□□□ -1.7
SNAPC3-201ENST00000380799 ADPGKQ9BRR6 497 aa4.41□□□□□ -1.7
SNAPC3-201ENST00000380799 KRTAP2-2Q9BYT5 123 aa4.41□□□□□ -1.7
SNAPC3-201ENST00000380799 PDZD7Q9H5P4 517 aa4.41□□□□□ -1.7
SNAPC3-201ENST00000380799 OGFRQ9NZT2 677 aa4.41□□□□□ -1.7
SNAPC3-201ENST00000380799 MARCH4Q9P2E8 410 aaPredicted RBP4.41□□□□□ -1.7
SNAPC3-201ENST00000380799 IPO11Q9UI26 975 aaKnown RBP4.41□□□□□ -1.7
SNAPC3-201ENST00000380799 CARD8Q9Y2G2 431 aa4.41□□□□□ -1.7
SNAPC3-201ENST00000380799 UTYO14607 1347 aa4.41□□□□□ -1.7
SNAPC3-201ENST00000380799 hCG_1809904A0A1W2PP81 198 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 A0A1W2PPE2 198 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 A0A1W2PR64 198 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 DDTLA6NHG4 134 aaPredicted RBP4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 EBAG9O00559 213 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 INPPL1O15357 1258 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 HS6ST1O60243 411 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 TBCAO75347 108 aaKnown RBP4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 NEURL1O76050 574 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 RNF8O76064 485 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 TPPPO94811 219 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 TMEM11P17152 192 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 EEF1DP29692 281 aaKnown RBP4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 HOXA13P31271 388 aaPredicted RBP4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 RYKP34925 604 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 CAPZA2P47755 286 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 CLCN3P51790 818 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 CLCNKBP51801 687 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 STAT2P52630 851 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 RAD23AP54725 363 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 KRTAP10-6P60371 365 aaPredicted RBP4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 YPEL5P62699 121 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 KRT83P78385 493 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 DRAP1Q14919 205 aaPredicted RBP4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 PGM5Q15124 567 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 ERMARDQ5T6L9 678 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 MEX3CQ5U5Q3 659 aaKnown RBP4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 HMBOX1Q6NT76 420 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 AAGABQ6PD74 315 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 IL27RAQ6UWB1 636 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 LRIG3Q6UXM1 1119 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 IRF2BP2Q7Z5L9 587 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 ZCCHC9Q8N567 271 aaKnown RBP4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 ZBTB8BQ8NAP8 495 aaPredicted RBP4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 APPL2Q8NEU8 664 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 SGCDQ92629 289 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 CCDC34Q96HJ3 373 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 OR2A14Q96R47 310 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 FIZ1Q96SL8 496 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 SIN3AQ96ST3 1273 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 IFIH1Q9BYX4 1025 aaKnown RBP4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 TKTL2Q9H0I9 626 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 PLK3Q9H4B4 646 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 ACTR5Q9H9F9 607 aaPredicted RBP4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 DECR2Q9NUI1 292 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 SETD4Q9NVD3 440 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 WSB2Q9NYS7 404 aaPredicted RBP4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 C5AR2Q9P296 337 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 SEC63Q9UGP8 760 aaKnown RBP4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 PADI1Q9ULC6 663 aa4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 LSM4Q9Y4Z0 139 aaKnown RBP4.4□□□□□ -1.71
SNAPC3-201ENST00000380799 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 TYW5A2RUC4 315 aaKnown RBP4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 HSPB2A8KAH6 182 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 A8MXE2 369 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 KLRF2D3W0D1 207 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 HCRTR2O43614 444 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 KIF1CO43896 1103 aaKnown RBP4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 TMCC1O94876 653 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 SRPRAP08240 638 aaKnown RBP4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 PCNAP12004 261 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 ZNF182P17025 639 aaPredicted RBP4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 TFEBP19484 476 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 MCCP23508 829 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 PON1P27169 355 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 CTNNA1P35221 906 aaKnown RBP4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 CENPAP49450 140 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 SCARB2Q14108 478 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 RBMS2Q15434 407 aaKnown RBP4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 HSPB2Q16082 182 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 TCP11X2Q5H9J9 407 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 C10orf25Q5T742 122 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 KIAA1161Q6NSJ0 714 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 CFAP77Q6ZQR2 320 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 PLPPR4Q7Z2D5 763 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 SLFN11Q7Z7L1 901 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 NOXA1Q86UR1 476 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 IGFN1Q86VF2 1251 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 TDRD5Q8NAT2 981 aaKnown RBP4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 Q8NFD4 153 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 CMASQ8NFW8 434 aaPredicted RBP4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 VPS33AQ96AX1 596 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 VCPIP1Q96JH7 1222 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 MARK4Q96L34 752 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 TMEM68Q96MH6 324 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 EDEM3Q9BZQ6 932 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 ZWILCHQ9H900 591 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 ERVMER34-1Q9H9K5 563 aa4.39□□□□□ -1.71
SNAPC3-201ENST00000380799 MOV10Q9HCE1 1003 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms