RNA–Protein interactions for RNA: ENST00000380221.7

TRAPPC10-202, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC10, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-202ENST00000380221 C16orf96A6NNT2 1141 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 LDB2O43679 373 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 USP1O94782 785 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 STX2P32856 288 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 HNF1BP35680 557 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 ANKRD20A4Q4UJ75 823 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 STEAP4Q687X5 459 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 GLT6D1Q7Z4J2 308 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 ZNF687Q8N1G0 1237 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 PTCD2Q8WV60 388 aaKnown RBP27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 MRM3Q9HC36 420 aaKnown RBP27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 FETUBQ9UGM5 382 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 SLC2A6Q9UGQ3 507 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 SLC24A2Q9UI40 661 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 MUTYHQ9UIF7 546 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 MTF2Q9Y483 593 aaPredicted RBP27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 TSPAN11A1L157 253 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 BUD23O43709 281 aaKnown RBP27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 HOXB2P14652 356 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 ATP5DP30049 168 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 POLR2LP62875 67 aaKnown RBP27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 SEMG2Q02383 582 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 UGP2Q16851 508 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 KDM7AQ6ZMT4 941 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 DSG4Q86SJ6 1040 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 UNC5BQ8IZJ1 945 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 GJD3Q8N144 294 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 SIX5Q8N196 739 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 GSDMBQ8TAX9 411 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 CYTH2Q99418 400 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 MAGEE1Q9HCI5 957 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 DKK3Q9UBP4 350 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 PPIL1Q9Y3C6 166 aa27.81■■■□□ 2.04
TRAPPC10-202ENST00000380221 A0A1W2PQF6 199 aa27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 MROH6A6NGR9 719 aa27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 A8MX80 341 aa27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 CHRNB1P11230 501 aa27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 COL9A1P20849 921 aa27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 TARSP26639 723 aaKnown RBP27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 PSMD8P48556 350 aa27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 PTPRCAPQ14761 206 aa27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 ESRP1Q6NXG1 681 aaKnown RBP27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 PARS2Q7L3T8 475 aaKnown RBP27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 CACUL1Q86Y37 369 aa27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 UBALD2Q8IYN6 164 aa27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 CYP4X1Q8N118 509 aa27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 ARRDC3Q96B67 414 aa27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 MRRFQ96E11 262 aaKnown RBP27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 SCRN2Q96FV2 425 aa27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 RSPH9Q9H1X1 276 aaPredicted RBP27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 IL1RAPL1Q9NZN1 696 aa27.8■■■□□ 2.04
TRAPPC10-202ENST00000380221 ZCWPW2A0A1B0GU75 182 aa27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 CAPN8A6NHC0 703 aa27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 PIAS1O75925 651 aa27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 SLC4A1P02730 911 aa27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 TIMP2P16035 220 aa27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 ATP1A2P50993 1020 aa27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 STARD6P59095 220 aa27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 STARD3Q14849 445 aa27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 SMAD1Q15797 465 aaKnown RBP27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 SPANXN3Q5MJ09 141 aa27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 TSTD2Q5T7W7 516 aa27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 TRMT10BQ6PF06 316 aaKnown RBP27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 Q6ZS52 159 aa27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 TTC7BQ86TV6 843 aa27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 HCAR2Q8TDS4 363 aa27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 POLR3BQ9NW08 1133 aaPredicted RBP27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 ZNF711Q9Y462 761 aa27.79■■■□□ 2.04
TRAPPC10-202ENST00000380221 NPIPB15A6NHN6 443 aaPredicted RBP27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 CRTAMO95727 393 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 COPAP53621 1224 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 SATB1Q01826 763 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 UBXN2BQ14CS0 331 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 TMED2Q15363 201 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 TAF1AQ15573 450 aaPredicted RBP27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 KBTBD12Q3ZCT8 623 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 USP45Q70EL2 814 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 NDUFAF2Q8N183 169 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 SHDQ96IW2 340 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 PAFAH2Q99487 392 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 TREX1Q9NSU2 369 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 FAM169AQ9Y6X4 670 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 KANSL1LA0AUZ9 987 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 C1QTNF3-AMACRE9PGA6 284 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 PLK4O00444 970 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 ITGB7P26010 798 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 PPP2R2AP63151 447 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 CNGA3Q16281 694 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 LYSMD3Q7Z3D4 306 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 ARFGAP2Q8N6H7 521 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 SERBP1Q8NC51 408 aaKnown RBP eCLIP27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 MCCC1Q96RQ3 725 aaPredicted RBP27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 FOXQ1Q9C009 403 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 LMAN1LQ9HAT1 526 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 LTB4R2Q9NPC1 389 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 HACD3Q9P035 362 aa27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 PSMC3IPQ9P2W1 217 aaPredicted RBP27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 MRPS17Q9Y2R5 130 aaKnown RBP27.78■■■□□ 2.04
TRAPPC10-202ENST00000380221 UPK3BL1B0FP48 263 aa27.77■■■□□ 2.04
TRAPPC10-202ENST00000380221 UPK3BL2E5RIL1 263 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms