RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 IHHQ14623 411 aa21.62■■□□□ 1.05
TRIM54-202ENST00000380075 RBM20Q5T481 1227 aaKnown RBP21.62■■□□□ 1.05
TRIM54-202ENST00000380075 C1orf146Q5VVC0 180 aa21.62■■□□□ 1.05
TRIM54-202ENST00000380075 RIPOR1Q6ZS17 1223 aa21.62■■□□□ 1.05
TRIM54-202ENST00000380075 CIR1Q86X95 450 aaPredicted RBP21.62■■□□□ 1.05
TRIM54-202ENST00000380075 GIPC2Q8TF65 315 aa21.62■■□□□ 1.05
TRIM54-202ENST00000380075 NAF1Q96HR8 494 aaKnown RBP21.62■■□□□ 1.05
TRIM54-202ENST00000380075 MRGBPQ9NV56 204 aa21.62■■□□□ 1.05
TRIM54-202ENST00000380075 MTRRQ9UBK8 725 aa21.62■■□□□ 1.05
TRIM54-202ENST00000380075 CDYLQ9Y232 598 aa21.62■■□□□ 1.05
TRIM54-202ENST00000380075 BACE2Q9Y5Z0 518 aa21.62■■□□□ 1.05
TRIM54-202ENST00000380075 GRID2O43424 1007 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 COX4I1P13073 169 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 ETFBP38117 255 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 CDH4P55283 916 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 PFKPQ01813 784 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 CAMK1Q14012 370 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 ACAP2Q15057 778 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 HECTD2Q5U5R9 776 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 FAM45BPQ6NSW5 357 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 Q7L0L9 218 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 LSMEM2Q8N112 164 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 CPSF7Q8N684 471 aaKnown RBP21.61■■□□□ 1.05
TRIM54-202ENST00000380075 POU5F2Q8N7G0 328 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 GPR150Q8NGU9 434 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 FAM45AQ8TCE6 357 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 FAR2Q96K12 515 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 YY1AP1Q9H869 796 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 VWA7Q9Y334 891 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 TRPC5OSA6NMA1 111 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 AURKAO14965 403 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 ZBTB14O43829 449 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 FKBP6O75344 327 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 SERPINF2P08697 491 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 THRAP10827 490 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 SLC25A3Q00325 362 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 CSHL1Q14406 222 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 AAGABQ6PD74 315 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 MYLK4Q86YV6 388 aaPredicted RBP21.61■■□□□ 1.05
TRIM54-202ENST00000380075 SLC22A9Q8IVM8 553 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 RNF168Q8IYW5 571 aaPredicted RBP21.61■■□□□ 1.05
TRIM54-202ENST00000380075 PHTF2Q8N3S3 785 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 OR6P1Q8NGX9 317 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 HDAC10Q969S8 669 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 PLD4Q96BZ4 506 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 UBXN10Q96LJ8 280 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 PANX3Q96QZ0 392 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 OR52B2Q96RD2 323 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 OLFM1Q99784 485 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 MGME1Q9BQP7 344 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 POMKQ9H5K3 350 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 MAN1C1Q9NR34 630 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.61■■□□□ 1.05
TRIM54-202ENST00000380075 HSFX1Q9UBD0 423 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 SEPT3Q9UH03 358 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 ZDHHC2Q9UIJ5 367 aa21.61■■□□□ 1.05
TRIM54-202ENST00000380075 GOLGA8QA0A0J9YX86 632 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 GOLGA8OA6NCC3 632 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 MEI4A8MW99 385 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 GOLGA8NF8WBI6 632 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 TBX10O75333 385 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 S1PR4O95977 384 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 PENKP01210 267 aaPredicted RBP21.6■■□□□ 1.05
TRIM54-202ENST00000380075 ACADSP16219 412 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 PGGT1BP53609 377 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 ERVFC1P60507 584 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 AP2B1P63010 937 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 GNA12Q03113 381 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 RFTN1Q14699 578 aaPredicted RBP21.6■■□□□ 1.05
TRIM54-202ENST00000380075 PGM2L1Q6PCE3 622 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 PTAR1Q7Z6K3 402 aaPredicted RBP21.6■■□□□ 1.05
TRIM54-202ENST00000380075 AFAP1L2Q8N4X5 818 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 TXNDC5Q8NBS9 432 aaKnown RBP21.6■■□□□ 1.05
TRIM54-202ENST00000380075 AGR3Q8TD06 166 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 BRSK1Q8TDC3 778 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 TRPC7Q9HCX4 862 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 LZTS1Q9Y250 596 aa21.6■■□□□ 1.05
TRIM54-202ENST00000380075 NVLO15381 856 aaKnown RBP21.59■■□□□ 1.05
TRIM54-202ENST00000380075 SOD2P04179 222 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 ATP6V1C1P21283 382 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 KCNQ1P51787 676 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 SATB1Q01826 763 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 NSUN2Q08J23 767 aaKnown RBP eCLIP21.59■■□□□ 1.05
TRIM54-202ENST00000380075 GALNT1Q10472 559 aaPredicted RBP21.59■■□□□ 1.05
TRIM54-202ENST00000380075 USP41Q3LFD5 358 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 LSM12Q3MHD2 195 aaKnown RBP21.59■■□□□ 1.05
TRIM54-202ENST00000380075 MRNIPQ6NTE8 343 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 PRSS55Q6UWB4 352 aaPredicted RBP21.59■■□□□ 1.05
TRIM54-202ENST00000380075 TRIM67Q6ZTA4 783 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 CCNYL1Q8N7R7 359 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 PPFIBP2Q8ND30 876 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 DNAJC9Q8WXX5 260 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 JADE3Q92613 823 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 CLPTM1LQ96KA5 538 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 NDNQ99608 321 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 NACA2Q9H009 215 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 EML4Q9HC35 981 aaKnown RBP21.59■■□□□ 1.05
TRIM54-202ENST00000380075 SSX2IPQ9Y2D8 614 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 CLDN11O75508 207 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 WISP3O95389 354 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms