RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 MEIS3P2A8K0S8 358 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ZNF623O75123 536 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ADH1BP00325 375 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 PAEPP09466 180 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 CREB1P16220 341 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ZNF8P17098 575 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ARL2P36404 184 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 PTPN9P43378 593 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 MRPS35P82673 323 aaKnown RBP6.57□□□□□ -1.36
NEDD9-202ENST00000379446 RBPJQ06330 500 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 NDUFA9Q16795 377 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 DUOXA1Q1HG43 343 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 FNBP1LQ5T0N5 605 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ERMARDQ5T6L9 678 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 C19orf48Q6RUI8 117 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 SIAH1Q8IUQ4 282 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 SORCS1Q8WY21 1168 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 TM9SF4Q92544 642 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 PMEPA1Q969W9 287 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ZNF669Q96BR6 464 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-202ENST00000379446 HIC2Q96JB3 615 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 GDF15Q99988 308 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 RMI1Q9H9A7 625 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 MTCH2Q9Y6C9 303 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 BCORQ6W2J9 1755 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 PLIN4Q96Q06 1357 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 IGLV3-22A0A075B6J6 115 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 A0A1B0GVT2 93 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 MMP20O60882 483 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 VPS4BO75351 444 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 PIAS1O75925 651 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 CBX6O95503 412 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 GUCA1CO95843 209 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 TCN2P20062 427 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 LMO2P25791 158 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 HOXC12P31275 282 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 DSG1Q02413 1049 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ABRQ12979 859 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 RCN1Q15293 331 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ARSJQ5FYB0 599 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-202ENST00000379446 FAM78AQ5JUQ0 283 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 CLLU1OSQ5K130 101 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ADGRF1Q5T601 910 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 BSNDQ8WZ55 320 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 RBM15Q96T37 977 aaKnown RBP eCLIP6.57□□□□□ -1.366e-7■■□□□ 13.6
NEDD9-202ENST00000379446 NDC1Q9BTX1 674 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-202ENST00000379446 LINC00597Q9H2U6 94 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 FZD3Q9NPG1 666 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 MTRRQ9UBK8 725 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 VPS4AQ9UN37 437 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ARHGAP26Q9UNA1 814 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 INTS1Q8N201 2190 aaKnown RBP6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ATP6V1G1O75348 118 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 F11P03951 625 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 CACNA2D1P54289 1103 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 NCALDP61601 193 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ROR2Q01974 943 aaKnown RBP6.57□□□□□ -1.36
NEDD9-202ENST00000379446 AUHQ13825 339 aaKnown RBP6.57□□□□□ -1.36
NEDD9-202ENST00000379446 PUM1Q14671 1186 aaKnown RBP eCLIP6.57□□□□□ -1.36
NEDD9-202ENST00000379446 PPM1JQ5JR12 505 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 C11orf63Q6NUN7 778 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 CENPUQ71F23 418 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 LCA5Q86VQ0 697 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ZDHHC17Q8IUH5 632 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 CCNJLQ8IV13 435 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 DDIASQ8IXT1 998 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ZBED8Q8IZ13 594 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 SEMA4DQ92854 862 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 CNDP2Q96KP4 475 aaKnown RBP6.57□□□□□ -1.36
NEDD9-202ENST00000379446 KREMEN1Q96MU8 473 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 PANX3Q96QZ0 392 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 SMOC1Q9H4F8 434 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 FANCFQ9NPI8 374 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 INTS10Q9NVR2 710 aaKnown RBP6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ZSCAN32Q9NX65 697 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 UVRAGQ9P2Y5 699 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 SERTAD3Q9UJW9 196 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 CORO1CQ9ULV4 474 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-202ENST00000379446 ARL2BPQ9Y2Y0 163 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 NFS1Q9Y697 457 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 DOCK2Q92608 1830 aa6.57□□□□□ -1.36
NEDD9-202ENST00000379446 GPR179Q6PRD1 2367 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 A0A1B0GUL6 1792 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 ZFHX2Q9C0A1 2572 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 C5orf58C9J3I9 102 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 GYG2O15488 501 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 MGRN1O60291 552 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 DNAJC8O75937 253 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 SMNDC1O75940 238 aaKnown RBP eCLIP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 ATG7O95352 703 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 UGT1A1P22309 533 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 CD6P30203 668 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 TLX1P31314 330 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 MLLT3P42568 568 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 CLK3P49761 638 aaKnown RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 ARSEP51690 589 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 ARL4CP56559 192 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 HYAL1Q12794 435 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 OVGP1Q12889 678 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms